{"id":"W2140634939","doi":"10.1128/jb.00996-08","title":"PilF Is an Outer Membrane Lipoprotein Required for Multimerization and Localization of the<i>Pseudomonas aeruginosa</i>Type IV Pilus Secretin","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; McMaster University; University of Toronto","funders":"Brookhaven National Laboratory; Canadian Institutes of Health Research; Hospital for Sick Children; Sick Kids Foundation; U.S. Department of Energy","keywords":"Pilus; Biology; Bacterial outer membrane; Mutant; Cell biology; Secretin family; Cell envelope; Biogenesis; Secretin; Pseudomonas aeruginosa; Cell membrane; Microbiology; Biochemistry; Escherichia coli; Membrane; Secretion; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001049271,0.0001167269,0.0002213185,0.00003336849,0.00007213673,0.000006832421,0.0001340422,0.0002018837,0.00001407332],"category_scores_gemma":[0.0001201277,0.00008208684,0.00007724074,0.00007151985,0.0001593231,0.0000175561,0.00004487926,0.00007127236,2.408086e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007702167,"about_ca_system_score_gemma":0.00004828633,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000079276,"about_ca_topic_score_gemma":0.000002436618,"domain_scores_codex":[0.9991552,0.00008626428,0.0004029854,0.0001580023,0.00007899472,0.0001185111],"domain_scores_gemma":[0.999032,0.0000111777,0.0004450978,0.0001477341,0.0003060694,0.00005787393],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005644931,0.00002358387,0.003686101,0.00002917335,0.00003023108,8.850163e-7,0.0001537669,0.00001818555,0.9943963,0.000008678925,0.00006794168,0.001020604],"study_design_scores_gemma":[0.0009223275,0.0009615778,0.02050079,0.00002359156,0.00002970613,0.0003032331,0.00001643783,0.0006267259,0.9730014,0.00008681705,0.003403916,0.0001234464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941882,0.0001358598,0.004964838,0.0002457255,0.0002583338,0.0001729307,0.00002295195,0.000002620284,0.000008527362],"genre_scores_gemma":[0.997626,0.0002302207,0.001273057,0.0003864226,0.0002936765,0.000002726211,0.0001161816,0.00001279052,0.00005894213],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02139493,"threshold_uncertainty_score":0.3347404,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01594147837684635,"score_gpt":0.2357041456263612,"score_spread":0.2197626672495148,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}