{"id":"W2140648654","doi":"10.1128/aem.02470-13","title":"Differential Induction of Antimicrobial REGIII by the Intestinal Microbiota and Bifidobacterium breve NCC2950","year":2013,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; McMaster University; Population Health Research Institute","funders":"","keywords":"Bifidobacterium breve; Biology; Microbiology; Bifidobacterium; Probiotic; Antimicrobial peptides; Gut flora; Antimicrobial; Bacteria; Immunology; Genetics; Lactobacillus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001535101,0.0002795575,0.000307597,0.0001949757,0.00009933757,0.0002507381,0.0001550592,0.000233031,0.0005762109],"category_scores_gemma":[0.0001453896,0.0001280469,0.0002365067,0.0001546682,0.0001589365,0.0001264909,0.0002515014,0.0003735409,0.0002308809],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001903231,"about_ca_system_score_gemma":0.000183261,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006790924,"about_ca_topic_score_gemma":0.001248682,"domain_scores_codex":[0.9998147,0.00003649503,0.00002355175,0.00003017211,0.00004857169,0.00004640421],"domain_scores_gemma":[0.9999064,0.000009473076,0.00002327279,0.00001390521,0.00001459682,0.00003238416],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001374056,0.00001822083,0.0001155871,0.00001229456,0.000001690303,0.00001025982,0.000005028039,0.00001193438,0.9993297,0.000008303364,0.000009408603,0.0003403425],"study_design_scores_gemma":[0.00002978115,0.001808837,0.01502419,0.00001386338,0.00002172499,0.0001889325,0.00006331766,0.0003821946,0.981152,0.0000176787,0.001291123,0.000006374745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982616,0.0004429815,0.000351141,0.00004334412,0.000009987713,0.00002130925,0.0002101289,0.00002218891,0.0006374045],"genre_scores_gemma":[0.9953676,0.000430718,0.001784076,0.00008834291,0.000004971481,0.00006171354,0.0007980882,0.00001574759,0.001448717],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006790924,"threshold_uncertainty_score":0.001927555,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003030788570955602,"score_gpt":0.167696925915172,"score_spread":0.1646661373442164,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}