{"id":"W2140934347","doi":"10.1142/s0219720013500029","title":"WHOLE GENOME IDENTITY-BY-DESCENT DETERMINATION","year":2012,"lang":"en","type":"article","venue":"Journal of Bioinformatics and Computational Biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Alberta Agricultural Research Institute","keywords":"Haplotype; Identity by descent; Haplotype estimation; Genetics; Genotyping; Genome; Biology; Linkage (software); Mendelian inheritance; Allele; Genotype; Computational biology; Single-nucleotide polymorphism; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005746547,0.0004461518,0.0006773091,0.0007232219,0.0005831884,0.0005952485,0.0008008158,0.0004548235,0.004689366],"category_scores_gemma":[0.002604478,0.0003274169,0.0006200995,0.0007832768,0.0002338119,0.0004266343,0.0006536461,0.0004683459,0.001207526],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004135534,"about_ca_system_score_gemma":0.001232428,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004019234,"about_ca_topic_score_gemma":0.005673286,"domain_scores_codex":[0.9996947,0.00007987388,0.00001742877,0.0001138881,0.00005436172,0.00003984311],"domain_scores_gemma":[0.9994416,0.0002245481,0.00005712628,0.0001344099,0.0001099155,0.00003247485],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0006601605,0.0003305031,0.05618086,0.0003182588,0.0002120097,0.0006216722,0.0005342524,0.2474818,0.05868869,0.04715561,0.01787522,0.569941],"study_design_scores_gemma":[0.0001213945,0.0001142684,0.01215942,0.00002134135,0.00005691172,0.000593355,0.0001339431,0.9261061,0.01654269,0.02848396,0.01563528,0.00003141735],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1269533,0.0001570454,0.8662523,0.0001493661,0.00003296927,0.0001452901,0.001895273,0.001523952,0.002890488],"genre_scores_gemma":[0.2293525,0.0001333085,0.7621711,0.00008002839,0.000008560851,0.000161142,0.004006275,0.0002580919,0.003829053],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004689366,"threshold_uncertainty_score":0.01568747,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0106751635985702,"score_gpt":0.2744912583305859,"score_spread":0.2638160947320157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}