{"id":"W2141053315","doi":"10.1093/molbev/mst149","title":"Pollen-Specific, but Not Sperm-Specific, Genes Show Stronger Purifying Selection and Higher Rates of Positive Selection Than Sporophytic Genes in Capsella grandiflora","year":2013,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Joint Genome Institute; Genome Canada; U.S. Department of Energy; Office of Science; National Science Foundation","keywords":"Biology; Gametophyte; Sporophyte; Negative selection; Gene; Outcrossing; Genetics; Selection (genetic algorithm); Pollen; Evolutionary biology; Genome; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000203994,0.0002717767,0.0003128135,0.0001836026,0.0001149692,0.00001747576,0.00008616759,0.000441475,0.00002222971],"category_scores_gemma":[0.0000184215,0.000253881,0.00006258382,0.0001639284,0.0002951933,0.00001868555,0.00007728981,0.0001570218,0.000005676581],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005127765,"about_ca_system_score_gemma":0.00003372424,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003809525,"about_ca_topic_score_gemma":0.0001066159,"domain_scores_codex":[0.9982308,0.0002757264,0.0003060241,0.0007517433,0.0000692094,0.0003664551],"domain_scores_gemma":[0.9994327,0.00001904907,0.0001446079,0.0001726671,0.0001643925,0.00006655628],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003033798,0.00005070371,0.09061585,0.0000158742,0.00006551933,0.000002362377,0.0000251782,0.00003701452,0.9054255,0.0008945939,0.00005558341,0.002508444],"study_design_scores_gemma":[0.0005639081,0.0004136311,0.3873489,0.00001276396,0.00001612102,0.0000802712,0.00005383039,0.00008059754,0.6100233,0.0004720001,0.0006980815,0.0002366176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9792414,0.01592126,0.003901042,0.0001741301,0.0002182984,0.0004222966,0.00003241954,0.00001473783,0.00007438785],"genre_scores_gemma":[0.9953108,0.003198258,0.0008331694,0.00003495586,0.0002404952,0.00004728866,0.0002054447,0.00002149599,0.000108099],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.296733,"threshold_uncertainty_score":0.9999914,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009954320594147859,"score_gpt":0.2351103715871165,"score_spread":0.2251560509929686,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}