{"id":"W2141437262","doi":"10.1111/j.1550-7408.2002.tb00332.x","title":"The Phylogenetic Position of the Pelobiont <i>Mastigamoeba balamuthi</i> Based on Sequences of rDNA and Translation Elongation Factors EF‐1α and EF‐2","year":2002,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Institute for Marine Biosciences","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Phylogenetic tree; Clade; Gene; Protein subunit; Genetics; Phylogenetics; Lineage (genetic); Evolutionary biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002322401,0.0001008,0.0001559436,0.00003784621,0.0001122944,0.000007695063,0.0001477682,0.0001253394,0.000009070497],"category_scores_gemma":[0.00004990346,0.00006105264,0.00008683291,0.00005537369,0.0003328204,0.000004941226,0.0000262257,0.0001026427,2.674226e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009402384,"about_ca_system_score_gemma":0.00003109718,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005660224,"about_ca_topic_score_gemma":0.00001023397,"domain_scores_codex":[0.999233,0.0002025804,0.0002845012,0.0001149428,0.00006006545,0.0001049204],"domain_scores_gemma":[0.9992927,0.00009027738,0.0003646993,0.0001197433,0.0001007256,0.00003181095],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001031776,0.00003866769,0.0421422,0.00002363634,0.00003905152,7.018983e-7,0.0001432426,0.0001967845,0.9563019,0.00002133732,0.00008723502,0.0009020959],"study_design_scores_gemma":[0.0009075746,0.001430018,0.1980853,0.00006746042,0.0001001728,0.0001164301,0.0001290797,0.0002321698,0.7984744,0.0001385748,0.0002068804,0.0001119501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969534,0.001938059,0.0002344175,0.0005084512,0.0001422659,0.0001294923,0.00004646055,8.322224e-7,0.00004665041],"genre_scores_gemma":[0.9993104,0.0003118691,0.0001969965,0.0001105676,0.00003705265,4.750342e-7,0.00001296717,0.000004253135,0.00001540057],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1578275,"threshold_uncertainty_score":0.2489654,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01114873694632857,"score_gpt":0.191560001911791,"score_spread":0.1804112649654624,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}