{"id":"W2141482343","doi":"10.1128/iai.03123-14","title":"Selection for a CEACAM Receptor-Specific Binding Phenotype during Neisseria gonorrhoeae Infection of the Human Genital Tract","year":2015,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Neisseria gonorrhoeae; Biology; Bacterial adhesin; Pathogen; Microbiology; Immunology; Phenotype; Context (archaeology); Chlamydia trachomatis; Sexually transmitted disease; Neisseriaceae; Innate immune system; Immune system; Virulence; Antibiotics; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003135284,0.000154131,0.0001952272,0.000145939,0.000813329,0.00003937337,0.00005774503,0.0002181367,0.0001485894],"category_scores_gemma":[0.0000869366,0.0001253921,0.0001134046,0.0002999468,0.00008362289,0.0002676373,0.00005372834,0.0003004493,0.00002434713],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009626106,"about_ca_system_score_gemma":0.00003360255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002575058,"about_ca_topic_score_gemma":0.0003242347,"domain_scores_codex":[0.9991256,0.0002194015,0.0002898118,0.0001661838,0.00001022128,0.0001887737],"domain_scores_gemma":[0.9993612,0.00004373675,0.0002001002,0.0001725508,0.0001977109,0.0000247533],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001081845,0.0001729008,0.1378592,0.00002407466,0.00005514902,3.523648e-9,0.0002618,0.000008165626,0.8595395,0.0002405373,0.0003918117,0.001338611],"study_design_scores_gemma":[0.002061138,0.0004686645,0.7083272,0.00003431879,0.00005420901,0.00008816036,0.0001035729,0.000005599105,0.2290472,0.000135412,0.05946571,0.0002087277],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963239,0.0001393883,0.0001105763,0.00002664936,0.002532544,0.0003562198,0.00001530656,0.00009465317,0.0004007465],"genre_scores_gemma":[0.9991058,0.0000899493,0.00001289365,0.000005033846,0.0001286928,0.00003876225,0.0000563782,0.00001685656,0.0005457091],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6304923,"threshold_uncertainty_score":0.6255552,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03507488449390977,"score_gpt":0.2709864001021008,"score_spread":0.2359115156081911,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}