{"id":"W2141512318","doi":"10.1136/sti.2008.034140","title":"Detection of Neisseria gonorrhoeae and Chlamydia trachomatis in pharyngeal and rectal specimens using the BD Probetec ET system, the Gen-Probe Aptima Combo 2 assay and culture","year":2009,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":117,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Health and Long Term Care; Hassle Free Clinic; Hospital for Sick Children; McMaster University; University of Toronto","funders":"","keywords":"Neisseria gonorrhoeae; Chlamydia trachomatis; Medicine; Gonorrhea; Gonococcal infection; Neisseria; Neisseriaceae; Virology; Chlamydia; Microbiology; Gynecology; Antibiotics; Sexually transmitted disease; Immunology; Biology; Bacteria; Syphilis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009571576,0.0002416151,0.0003161338,0.0002334872,0.0006177087,0.00007016596,0.0001049322,0.0002506521,0.00002186274],"category_scores_gemma":[0.0001027722,0.0001606154,0.00005136088,0.000565906,0.0004691237,0.0003485392,0.00002853678,0.0008944237,0.0000034447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007261521,"about_ca_system_score_gemma":0.00006598138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006786925,"about_ca_topic_score_gemma":0.0007454179,"domain_scores_codex":[0.9979608,0.0008583553,0.0003968201,0.0004261667,0.00004156622,0.0003163038],"domain_scores_gemma":[0.999114,0.0003035603,0.0001245803,0.0003027208,0.0001275505,0.00002754786],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009272391,0.0002845956,0.008386392,0.00007736524,0.0002000464,0.000001042169,0.004500302,0.0000901967,0.9675009,0.0009961482,0.00001451502,0.01785579],"study_design_scores_gemma":[0.002323988,0.001065038,0.9481706,0.0001262187,0.0002374395,0.00238012,0.002576309,0.0007780565,0.03929966,0.000679703,0.001967136,0.0003957114],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895403,0.003050463,0.004754724,0.0004440686,0.0002355217,0.001181956,0.00003152354,0.00008487475,0.0006765408],"genre_scores_gemma":[0.9992886,0.0002988908,0.0001197031,0.00003822656,0.00003523552,0.00006105366,0.00001500319,0.00001863599,0.0001246709],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9397842,"threshold_uncertainty_score":0.6549708,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01466976447799318,"score_gpt":0.2790543596739423,"score_spread":0.2643845951959491,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}