{"id":"W2141803082","doi":"10.1534/genetics.110.116285","title":"Critical Determinants for Chromatin Binding by <i>Saccharomyces cerevisiae</i> Yng1 Exist Outside of the Plant Homeodomain Finger","year":2010,"lang":"en","type":"article","venue":"Genetics","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Saccharomyces cerevisiae; Biology; Genetics; Chromatin; Homeobox; DNA; Computational biology; Gene; Transcription factor","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002801931,0.0001152498,0.0001703098,0.000007710942,0.0001924874,0.00003928318,0.0005019662,0.0001503246,0.00005335331],"category_scores_gemma":[0.0003304402,0.0000404049,0.00009117815,0.0001099541,0.0002251017,0.00001991284,0.0001492889,0.00016073,0.00001082799],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000545239,"about_ca_system_score_gemma":0.00001356942,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001472345,"about_ca_topic_score_gemma":0.0003352327,"domain_scores_codex":[0.9989553,0.0000753467,0.0002102883,0.0002264458,0.0001821024,0.0003504865],"domain_scores_gemma":[0.9991628,0.0005422741,0.00007126277,0.00009441,0.00005296886,0.00007627224],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000008925653,0.0000293887,0.01229386,0.00001355057,0.000006342853,0.000001807254,0.00001383425,1.065174e-7,0.9797393,0.00004303463,0.002670764,0.005179084],"study_design_scores_gemma":[0.0001412729,0.0002134187,0.02807782,0.00003531588,0.00002004011,0.00005083832,0.00005144038,0.00008037411,0.9548553,0.000468995,0.01582397,0.0001811866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973101,0.0001643773,0.000004794194,0.0008892366,0.0001729254,0.0002605062,0.001080754,0.00001259012,0.0001047397],"genre_scores_gemma":[0.9988493,0.00003401413,0.0007246382,0.0001044744,0.0001113733,0.00002211803,0.00005876952,0.000001662307,0.0000935963],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02488398,"threshold_uncertainty_score":0.1647664,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02444198782262948,"score_gpt":0.2685293646830501,"score_spread":0.2440873768604206,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}