{"id":"W2141921982","doi":"10.1128/jb.00405-11","title":"Whole-Genome Sequences of Four Mycobacterium bovis BCG Vaccine Strains","year":2011,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"National Key Research and Development Program of China; Canadian Institutes of Health Research","keywords":"Mycobacterium bovis; Biology; BCG vaccine; Mycobacterium tuberculosis; Whole genome sequencing; Microbiology; Genome; Tuberculosis; Virology; Mycobacterium; Mycobacterium tuberculosis complex; Genetics; Vaccination; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003462997,0.0006920478,0.0006308669,0.001008154,0.0004690872,0.0004262046,0.0005046242,0.000808938,0.002294167],"category_scores_gemma":[0.001009992,0.0003423448,0.0007826624,0.001559899,0.0002607541,0.0003457784,0.0003929666,0.001081159,0.001552271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003013668,"about_ca_system_score_gemma":0.0006173642,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003091089,"about_ca_topic_score_gemma":0.003699144,"domain_scores_codex":[0.9997235,0.00005412631,0.0000435976,0.00005960359,0.00006825913,0.00005091009],"domain_scores_gemma":[0.999424,0.0001524982,0.0001346444,0.00005854603,0.0001360909,0.00009428952],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001879475,0.0002029673,0.007691348,0.0007151366,0.0001052639,0.0004515402,0.0004097944,0.0009099434,0.9693113,0.0004761621,0.001861981,0.01598508],"study_design_scores_gemma":[0.0004788158,0.0027965,0.4180741,0.0004053983,0.001366741,0.003965776,0.001322151,0.006526999,0.3824034,0.001520246,0.180861,0.0002787672],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8640127,0.005219,0.01450504,0.0008512198,0.0004341306,0.0004868783,0.1087977,0.0003735916,0.005319802],"genre_scores_gemma":[0.5840489,0.00353464,0.04798088,0.0006684875,0.00008726502,0.0003306524,0.3568295,0.0003013388,0.006218303],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003091089,"threshold_uncertainty_score":0.007674694,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06869851912249333,"score_gpt":0.3206779004193477,"score_spread":0.2519793812968544,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}