{"id":"W2141939877","doi":"10.1128/jb.01592-06","title":"Functional Characterization of the Initiation Enzyme of S-Layer Glycoprotein Glycan Biosynthesis in <i>Geobacillus stearothermophilus</i> NRS 2004/3a","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Institute for Biological Sciences; Western University","funders":"","keywords":"Geobacillus stearothermophilus; Biology; Glycan; Biosynthesis; Glycoprotein; Biochemistry; Enzyme; Thermophile","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009510506,0.0001206988,0.000270272,0.0002307664,0.00003523298,0.000006367956,0.0002231953,0.0002228172,0.0001593279],"category_scores_gemma":[0.0002446668,0.00009060416,0.0001478504,0.00025649,0.0001508928,0.00001650723,0.00005329169,0.0001884424,0.000002541486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003919467,"about_ca_system_score_gemma":0.0001864342,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002808717,"about_ca_topic_score_gemma":0.00006539508,"domain_scores_codex":[0.9984081,0.0002188127,0.000771534,0.0001437157,0.0002540464,0.0002038112],"domain_scores_gemma":[0.998562,0.00004093039,0.0007440287,0.0002201794,0.0003766305,0.0000562262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001030935,0.00010117,0.01004545,0.0000227539,0.00004053051,0.000003378009,0.0000531739,0.00004966592,0.9852837,0.00005017666,0.00004069341,0.003278356],"study_design_scores_gemma":[0.0007412533,0.0003669069,0.2937044,0.00004148526,0.000007764593,0.00005586825,0.00002800445,0.00001207075,0.7020091,0.00004587448,0.002920491,0.00006670126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996253,0.0001056622,0.00259118,0.0003785676,0.0002409162,0.0002255462,0.00002785632,0.000001557492,0.0001757354],"genre_scores_gemma":[0.9992643,0.00009890098,0.000134197,0.0001229942,0.0002027046,0.00000369209,0.00002858306,0.00001389797,0.0001307044],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.283659,"threshold_uncertainty_score":0.369473,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01602014738203954,"score_gpt":0.2484479571640749,"score_spread":0.2324278097820354,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}