{"id":"W2141992911","doi":"10.1128/jcm.42.10.4686-4696.2004","title":"Accuracy of Phenotypic and Genotypic Testing for Identification of <i>Streptococcus pneumoniae</i> and Description of <i>Streptococcus pseudopneumoniae</i> sp. nov","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":253,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen Elizabeth II Health Sciences Centre","funders":"","keywords":"Streptococcus pneumoniae; Streptococcus oralis; Microbiology; Streptococcus mitis; Biology; Pneumolysin; Streptococcaceae; Streptococcus; Viridans streptococci; Genotype; Polymerase chain reaction; Bacteria; Genetics; Gene; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005740979,0.0005572859,0.0003804428,0.00166486,0.0002491539,0.00158127,0.0009976579,0.001130539,0.000950284],"category_scores_gemma":[0.03444437,0.0003867355,0.0003662586,0.000574936,0.0007331361,0.001026127,0.0008624664,0.0005823167,0.001420144],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005514417,"about_ca_system_score_gemma":0.0003702805,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003053233,"about_ca_topic_score_gemma":0.004262489,"domain_scores_codex":[0.9887483,0.003491772,0.001724129,0.001249321,0.004080158,0.0007062542],"domain_scores_gemma":[0.9724664,0.01250669,0.003723879,0.003803496,0.006504462,0.000995083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009994054,0.00008820467,0.9195772,0.0001486816,0.0001089181,0.0003001793,0.0001860309,0.001261998,0.03215979,0.0002006309,0.0005628985,0.044406],"study_design_scores_gemma":[0.00002112197,0.0005526547,0.9111889,0.0001541908,0.000213886,0.005188657,0.0003784481,0.01823457,0.05903404,0.0004059563,0.004580059,0.00004751601],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9696154,0.003319438,0.009584984,0.0004417713,0.0002549708,0.0000462225,0.00105625,0.0002807808,0.01540022],"genre_scores_gemma":[0.9954407,0.0002781232,0.003104057,0.0000736828,0.00002785706,0.000007938217,0.0005442008,0.00001777619,0.0005056908],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005740979,"threshold_uncertainty_score":0.03036159,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0596304407565772,"score_gpt":0.3536214053946956,"score_spread":0.2939909646381184,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}