{"id":"W2142042648","doi":"10.1128/jcm.00391-11","title":"Fourteen-Genome Comparison Identifies DNA Markers for Severe-Disease-Associated Strains of Clostridium difficile","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; McGill University and Génome Québec Innovation Centre; Jewish General Hospital; McGill University","funders":"National Human Genome Research Institute; Genome Canada; Canadian Institutes of Health Research; Association of Medical Microbiology and Infectious Disease Canada; Bayer HealthCare; McGill University","keywords":"Biology; Clostridium difficile; Genome; Candidate gene; Genetics; Single-nucleotide polymorphism; Gene; Genetic marker; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003557742,0.0002694696,0.0004233319,0.001140679,0.0002436516,0.0004163393,0.0002439468,0.0004067945,0.001133723],"category_scores_gemma":[0.0008351555,0.0001242229,0.0005437699,0.001244493,0.0001232368,0.0001533148,0.0005577708,0.0003704706,0.0002812961],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002610151,"about_ca_system_score_gemma":0.000252211,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001245245,"about_ca_topic_score_gemma":0.002208761,"domain_scores_codex":[0.9996233,0.00005326363,0.00003154399,0.0001427804,0.00008066465,0.00006842604],"domain_scores_gemma":[0.9993972,0.0001896029,0.0001580444,0.00004801337,0.0001043698,0.0001027636],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001765785,0.0002552085,0.2011724,0.0003095465,0.000452564,0.0003776025,0.0003490599,0.0006117599,0.7666786,0.0002706119,0.000601485,0.0271554],"study_design_scores_gemma":[0.00003264185,0.0004594943,0.9705235,0.00002827472,0.0002314048,0.0008142262,0.0002080344,0.002086405,0.02221498,0.0001401802,0.00324549,0.00001537682],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956994,0.0004157346,0.001085512,0.00002590883,0.000008142543,0.00001699236,0.002278886,0.00002596124,0.0004432732],"genre_scores_gemma":[0.9813141,0.000294807,0.004905342,0.0000992513,0.000007890777,0.00002565815,0.01294603,0.00002562277,0.0003814077],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001245245,"threshold_uncertainty_score":0.003792644,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1283337534929227,"score_gpt":0.3891858861263079,"score_spread":0.2608521326333852,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}