{"id":"W2142133759","doi":"10.1093/molbev/msq050","title":"Splicing and Transcription Differ between Spore and Intracellular Life Stages in the Parasitic Microsporidia","year":2010,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Biology; Microsporidia; Encephalitozoon cuniculi; Transcription (linguistics); Intron; Gene; Trans-splicing; Genetics; RNA splicing; Intracellular parasite; Genome; RNA; Cell biology; Spore; Microbiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003020254,0.0001198008,0.0001597589,0.00007964538,0.0001954619,0.00001382504,0.00004503382,0.0003224479,0.00001142655],"category_scores_gemma":[0.0001188055,0.0000913692,0.00002095807,0.00006404693,0.0003989967,0.00003883772,0.00001405809,0.0003572684,0.000006156468],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007197278,"about_ca_system_score_gemma":0.00001517129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001861964,"about_ca_topic_score_gemma":0.00006713007,"domain_scores_codex":[0.9992539,0.0001511832,0.0001550058,0.0002168559,0.00001232656,0.0002107495],"domain_scores_gemma":[0.9996426,0.0001676601,0.0000371291,0.0001117589,0.00001766509,0.00002324468],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001140104,0.00001982818,0.4054933,0.000007064137,0.00001683436,0.000003666091,0.0001740204,4.496666e-7,0.5849416,0.008811928,0.0000147357,0.0005051291],"study_design_scores_gemma":[0.0006615804,0.0001260288,0.9713021,0.00001102789,0.00007069107,0.0001148759,0.0001512484,0.00001070894,0.02325004,0.003540825,0.0006325364,0.0001283559],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914094,0.003813387,0.003906784,0.000429586,0.0001952681,0.000168803,0.00002327745,0.00001530449,0.00003823771],"genre_scores_gemma":[0.9994357,0.0001855392,0.00006505627,0.0001460661,0.00003356636,0.00001300157,0.0001031019,0.000005335343,0.00001261354],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5658087,"threshold_uncertainty_score":0.3725928,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005531873234623307,"score_gpt":0.2448401891542539,"score_spread":0.2393083159196306,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}