{"id":"W2142280055","doi":"10.1093/bioinformatics/btt710","title":"ChromoHub V2: cancer genomics","year":2013,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Ministero dello Sviluppo Economico; Ontario Ministry of Economic Development and Innovation; Ontario Genomics Institute; Canadian Institutes of Health Research; Ontario Genomics; Genome Canada; Wellcome Trust; Eli Lilly Canada; GlaxoSmithKline; Pfizer; Eli Lilly and Company","keywords":"Chromatin; Genomics; Epigenetics; Histone; Computational biology; Biology; Genome; Cancer; Chromatin remodeling; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001634213,0.001420868,0.001125719,0.001935425,0.0006261587,0.001959067,0.002732826,0.0009203067,0.09078471],"category_scores_gemma":[0.003712067,0.0008821549,0.001090929,0.001989321,0.0004588766,0.001438441,0.002290068,0.001729836,0.04356501],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001244139,"about_ca_system_score_gemma":0.001600515,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004386095,"about_ca_topic_score_gemma":0.004130981,"domain_scores_codex":[0.9993369,0.00009749757,0.00003424681,0.0001745268,0.0002538761,0.000103016],"domain_scores_gemma":[0.998861,0.0004738353,0.00007449574,0.0001934352,0.0002001088,0.0001970276],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001834553,0.0001007778,0.003083204,0.001027747,0.0001815084,0.0002900241,0.0001762734,0.00168654,0.006698904,0.008013736,0.9078931,0.06901358],"study_design_scores_gemma":[0.001528192,0.0002466211,0.01091975,0.0002441587,0.0002169156,0.0008693886,0.0001145027,0.05826291,0.04956036,0.03270347,0.8450487,0.0002849095],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.0071418,0.0007288155,0.1013885,0.001365702,0.0004471249,0.0004598461,0.1775546,0.6880853,0.0228283],"genre_scores_gemma":[0.1049388,0.001115094,0.1786878,0.003375559,0.0003959489,0.002280721,0.492247,0.1866287,0.03033042],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.09078471,"threshold_uncertainty_score":0.3037051,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008853294606747695,"score_gpt":0.229220323251506,"score_spread":0.2203670286447583,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}