{"id":"W2142343269","doi":"10.1128/genomea.00549-14","title":"Complete Genome Sequence of a Staphylococcus epidermidis Bacteriophage Isolated from the Anterior Nares of Humans","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Marshfield Clinic Research Foundation","keywords":"Biology; Anterior nares; Genome; Staphylococcus epidermidis; Bacteriophage; Whole genome sequencing; Sequence (biology); Virulence; Genetics; Virology; Staphylococcus aureus; Bacteria; Gene; Escherichia coli; Methicillin-resistant Staphylococcus aureus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001915668,0.0006600434,0.000804864,0.001478134,0.0005967922,0.0005247956,0.0003155007,0.0005855592,0.002968016],"category_scores_gemma":[0.0004626702,0.0003522438,0.0007835015,0.001485919,0.0002382498,0.0002459257,0.0003879255,0.0008420484,0.002585766],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003435668,"about_ca_system_score_gemma":0.001367815,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005098691,"about_ca_topic_score_gemma":0.003744795,"domain_scores_codex":[0.9998296,0.00001647928,0.00001637971,0.00005297055,0.00006105112,0.00002354312],"domain_scores_gemma":[0.9996279,0.00007714984,0.0000692002,0.00002827129,0.0001129805,0.00008443816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001544487,0.00009407217,0.004330643,0.001576914,0.00009381388,0.001240363,0.0005894119,0.0006609167,0.946613,0.0004659192,0.004929676,0.03786083],"study_design_scores_gemma":[0.0004551235,0.001299234,0.4083218,0.0008590905,0.0009205916,0.005520388,0.001112388,0.002706394,0.2441836,0.001649492,0.3327201,0.0002517161],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5765427,0.01549943,0.03875201,0.001110728,0.0005108603,0.0004799804,0.3568003,0.0009515235,0.009352379],"genre_scores_gemma":[0.2653858,0.008080764,0.05392731,0.0003985093,0.0002706033,0.00033273,0.6596715,0.0004599848,0.0114727],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005098691,"threshold_uncertainty_score":0.01013803,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02285199429417851,"score_gpt":0.2469446954303287,"score_spread":0.2240927011361502,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}