{"id":"W2142401625","doi":"10.1086/606117","title":"Multidrug‐Resistant Variants of HIV Type 1 (HIV‐1) Can Exist in Cells as Defective Quasispecies and Be Rescued by Superinfection with Other Defective HIV‐1 Variants","year":2009,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Provirus; Virology; Viral quasispecies; Superinfection; Biology; Reverse transcriptase; Virus; SAMHD1; Mutation; Multiple drug resistance; Wild type; Viral replication; Reversion; Drug resistance; Genetics; Mutant; RNA; Genome; Gene; Phenotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003472279,0.0002809311,0.0002599467,0.0002281807,0.0001604453,0.000397081,0.0001988571,0.000254969,0.001183639],"category_scores_gemma":[0.0004223935,0.0002366089,0.0002059913,0.0001243751,0.0002083033,0.000248272,0.0002713155,0.0004538547,0.0006080701],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000153457,"about_ca_system_score_gemma":0.000111946,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000215373,"about_ca_topic_score_gemma":0.0002658118,"domain_scores_codex":[0.9998166,0.00004672978,0.00002395937,0.00003727734,0.00004044546,0.00003510161],"domain_scores_gemma":[0.9995505,0.0001406302,0.00007895203,0.0001312863,0.00003834693,0.00006022718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000347525,0.00001605357,0.000840023,0.00001817212,0.000003982948,0.00008000254,0.00005005152,0.00003263335,0.9979466,0.0002135333,0.0000225875,0.0007416772],"study_design_scores_gemma":[0.00003654491,0.0008514927,0.02035459,0.00001897836,0.00005550683,0.005631315,0.0001590037,0.001473328,0.9631749,0.0008032341,0.007418835,0.000022325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958919,0.0006023373,0.002606313,0.00003696221,0.00001459568,0.00002022393,0.0001605632,0.00005615798,0.0006109551],"genre_scores_gemma":[0.9947285,0.00036159,0.003284553,0.0000249265,0.00001015042,0.00002492569,0.0005576893,0.00002929671,0.0009783463],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001183639,"threshold_uncertainty_score":0.003959656,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007444514792268025,"score_gpt":0.2389815306767565,"score_spread":0.2315370158844885,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}