{"id":"W2143000346","doi":"10.1093/molbev/msg006","title":"A Novel Polyubiquitin Structure in Cercozoa and Foraminifera: Evidence for a New Eukaryotic Supergroup","year":2003,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Ubiquitin; Gene; Ubiquitin ligase; Phylogenetic tree; Phylogenetics; Amino acid; Proteasome; Ribosomal protein; Cell biology; Genetics; Biochemistry; RNA; Ribosome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001250818,0.0001916474,0.0002940054,0.0008180926,0.0008836191,0.0005344827,0.0002417993,0.0005224824,0.001285329],"category_scores_gemma":[0.0003582322,0.0002039105,0.0001591098,0.0005815393,0.0004754907,0.0006469279,0.000645945,0.0002317905,0.000339462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002662892,"about_ca_system_score_gemma":0.0001920476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005419073,"about_ca_topic_score_gemma":0.0007850627,"domain_scores_codex":[0.9998858,0.000007734372,0.000008158209,0.00005257668,0.00002183217,0.00002395189],"domain_scores_gemma":[0.9996051,0.00005625272,0.0001410578,0.00004431948,0.00004100235,0.0001122997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008272027,0.00005246087,0.07321148,0.0002759872,0.0000541306,0.001215267,0.0014159,0.0001502235,0.8952486,0.001099551,0.0001248427,0.02632443],"study_design_scores_gemma":[0.00006379638,0.0006036496,0.9351761,0.00007475138,0.0001398462,0.007916596,0.001280432,0.001224355,0.03459912,0.002394958,0.01648554,0.00004072197],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974135,0.001276867,0.0004753401,0.00004826709,0.000004848574,0.000005137757,0.0000684012,0.00001536727,0.0006923579],"genre_scores_gemma":[0.9973272,0.0005710312,0.0011814,0.00005077949,0.00001779313,0.00001274264,0.000400606,0.00000623327,0.0004321602],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001285329,"threshold_uncertainty_score":0.004299819,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01778833412176539,"score_gpt":0.2738317098893354,"score_spread":0.25604337576757,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}