{"id":"W2143116255","doi":"10.1371/journal.pone.0010753","title":"Influence of M. tuberculosis Lineage Variability within a Clinical Trial for Pulmonary Tuberculosis","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; University of California, San Diego; Centers for Disease Control and Prevention; University of North Texas; National Institutes of Health; U.S. Department of Health and Human Services; Case Western Reserve University; University of Southern California; U.S. Department of Veterans Affairs; National Institute of Allergy and Infectious Diseases; Johns Hopkins University","keywords":"Tuberculosis; Lineage (genetic); Biology; Mycobacterium tuberculosis; Disease; Medicine; Genetics; Internal medicine; Gene; Pathology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.006604319,0.0002791984,0.001467031,0.0001745584,0.00009869906,0.00001215269,0.0003308582,0.000628542,0.0002026728],"category_scores_gemma":[0.03898566,0.0002302876,0.0005079241,0.0003449644,0.0005650979,0.0001544345,0.0001568902,0.001299766,0.00005208694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004615503,"about_ca_system_score_gemma":0.0003311514,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002115283,"about_ca_topic_score_gemma":0.00005742529,"domain_scores_codex":[0.9956516,0.0005422042,0.001758166,0.0007826712,0.0006219049,0.0006434618],"domain_scores_gemma":[0.9929016,0.004173234,0.000318777,0.001206198,0.0007798231,0.0006203706],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.07732476,0.0269423,0.524169,0.001740614,0.002747114,0.00002692316,0.000150329,0.0000344208,0.3628758,0.001060525,0.0009491544,0.001979066],"study_design_scores_gemma":[0.08772193,0.01372554,0.7075759,0.0007842259,0.003751557,0.00006903618,0.00006026957,0.02305225,0.1576495,0.003383589,0.001182826,0.00104338],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914671,0.00004553538,0.0000370399,0.004488516,0.0001617488,0.002747913,0.000108255,0.00009533497,0.0008485269],"genre_scores_gemma":[0.9827643,0.0001665573,0.01411147,0.001077549,0.001082085,0.0005022297,0.0000822136,0.00004600652,0.0001676102],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2052263,"threshold_uncertainty_score":0.9691094,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09684050639814203,"score_gpt":0.376626415973987,"score_spread":0.279785909575845,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}