{"id":"W2143339810","doi":"10.1098/rstb.2011.0247","title":"Genomics of adaptation and speciation in cichlid fishes: recent advances and analyses in African and Neotropical lineages","year":2011,"lang":"en","type":"review","venue":"Philosophical Transactions of the Royal Society B Biological Sciences","topic":"Fish biology, ecology, and behavior","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Universität Konstanz; Deutsche Forschungsgemeinschaft","keywords":"Cichlid; Biology; Evolutionary biology; Sympatric speciation; Adaptive radiation; Adaptation (eye); Expressed sequence tag; Genetic algorithm; Sexual selection; Natural selection; Selection (genetic algorithm); Genome; Zoology; Phylogenetics; Gene; Genetics; Fish <Actinopterygii>; Fishery","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003876455,0.0002579174,0.0003285448,0.001139068,0.0002226362,0.0005246201,0.0001714855,0.0002552735,0.0002891294],"category_scores_gemma":[0.0003415365,0.0001348366,0.0002928059,0.001486912,0.0002665521,0.000560846,0.0004011459,0.0003250659,0.00006773174],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003531686,"about_ca_system_score_gemma":0.0004216971,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002332335,"about_ca_topic_score_gemma":0.002974031,"domain_scores_codex":[0.9999015,0.000008128965,0.000008871133,0.000046629,0.00002363144,0.00001127775],"domain_scores_gemma":[0.9997295,0.00007836374,0.0000939053,0.000008994732,0.00005818093,0.00003109651],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003692822,0.00005245128,0.1228261,0.005886384,0.0003791255,0.001196912,0.002714036,0.001644239,0.3561227,0.001240293,0.001774104,0.5057944],"study_design_scores_gemma":[0.00001009185,0.0001249452,0.9461486,0.000331717,0.0002783804,0.0009388051,0.0006815761,0.000858509,0.007023072,0.0008753844,0.04268868,0.00004029019],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.6588713,0.3311758,0.003780297,0.001455133,0.00006991089,0.00002704574,0.001565685,0.00008515928,0.002969751],"genre_scores_gemma":[0.6117767,0.3635127,0.01685047,0.001316827,0.0003578148,0.00006799971,0.003574359,0.0000480841,0.002495053],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.002332335,"threshold_uncertainty_score":0.00463748,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1784525408656093,"score_gpt":0.3397700997114596,"score_spread":0.1613175588458503,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}