{"id":"W2143391838","doi":"10.1136/thoraxjnl-2014-206420","title":"Streptococcus pneumoniae triggers progression of pulmonary fibrosis through pneumolysin","year":2015,"lang":"en","type":"article","venue":"Thorax","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; Deutsches Zentrum für Lungenforschung; Deutsche Forschungsgemeinschaft; Center for Sepsis Control and Care; Bundesministerium für Bildung und Forschung","keywords":"Pneumolysin; Fibrosis; Medicine; Pulmonary fibrosis; Lung; Immunology; Streptococcus pneumoniae; Pathology; Microbiology; Biology; Internal medicine; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002288476,0.0002367649,0.0004982986,0.00009509186,0.00005947681,0.00001624233,0.0001600363,0.0001484096,0.0001190401],"category_scores_gemma":[0.00007738347,0.0001892516,0.0002727456,0.0003305114,0.0001726101,0.0002125188,0.00009820932,0.0001962966,0.00007454059],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001096591,"about_ca_system_score_gemma":0.0002558992,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006444152,"about_ca_topic_score_gemma":6.623013e-7,"domain_scores_codex":[0.9982178,0.00008925533,0.0004427467,0.0003592143,0.0005508382,0.000340128],"domain_scores_gemma":[0.9987386,0.00003523672,0.0001850887,0.0004829647,0.0002343725,0.0003236752],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.03473118,0.006235042,0.09490568,0.003214141,0.0006255789,0.002256838,0.003378431,0.00009625556,0.6758105,0.003138637,0.02717195,0.1484358],"study_design_scores_gemma":[0.02078614,0.08894962,0.1439758,0.02241708,0.006622811,0.002037602,0.01276566,0.01774674,0.4496892,0.01605781,0.2128493,0.00610225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9546846,0.002912383,0.0001912978,0.001223594,0.000468278,0.001051005,0.000122585,0.0001974799,0.03914884],"genre_scores_gemma":[0.9976913,0.00007400689,0.0007305474,0.0001133218,0.0002806629,0.00005420411,0.00009995785,0.00004004653,0.0009159336],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2261213,"threshold_uncertainty_score":0.7717457,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0376062064232847,"score_gpt":0.3340436598786787,"score_spread":0.296437453455394,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}