{"id":"W2143497668","doi":"10.1128/jb.01201-06","title":"Identification of Genes Regulated by the <i>cepIR</i> Quorum-Sensing System in <i>Burkholderia cenocepacia</i> by High-Throughput Screening of a Random Promoter Library","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Burkholderia cenocepacia; Biology; Quorum sensing; Identification (biology); Gene; Computational biology; Genetics; Throughput; Burkholderia; Microbiology; Bacteria; Virulence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002607129,0.0005365814,0.0007034027,0.0004985734,0.0001643883,0.000471109,0.0002717553,0.0002847106,0.0004310577],"category_scores_gemma":[0.000391495,0.0002346465,0.0004044846,0.0006222966,0.0001860642,0.0001635774,0.000309361,0.0003948324,0.000471599],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002640356,"about_ca_system_score_gemma":0.0002545813,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007946736,"about_ca_topic_score_gemma":0.00125831,"domain_scores_codex":[0.9996746,0.00003444203,0.00003049835,0.00009333856,0.0001122299,0.00005492609],"domain_scores_gemma":[0.9997231,0.00007180101,0.0000893307,0.00002671164,0.00004735462,0.00004162389],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004823378,0.00001575415,0.0007896581,0.00003396575,0.000004111194,0.00003908718,0.00001271888,0.00006222617,0.9978465,0.00001151769,0.00002446288,0.001111776],"study_design_scores_gemma":[0.00002992796,0.0003675755,0.05387844,0.00002241338,0.00007319414,0.001087362,0.0001219481,0.002854583,0.9385821,0.0000564011,0.002901149,0.00002510069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9814672,0.001381025,0.01018799,0.0001368657,0.00001761554,0.0001152878,0.005700779,0.0002659894,0.0007273253],"genre_scores_gemma":[0.9568549,0.001595847,0.02557249,0.0001925465,0.00002050516,0.0002219337,0.01354631,0.0001147354,0.001880696],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007946736,"threshold_uncertainty_score":0.001915693,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004826320797069323,"score_gpt":0.1961891630985939,"score_spread":0.1913628423015246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}