{"id":"W2143701639","doi":"10.1093/glycob/cwp150","title":"The role of CDR H3 in antibody recognition of a synthetic analog of a lipopolysaccharide antigen","year":2009,"lang":"en","type":"article","venue":"Glycobiology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences; University of Victoria","funders":"","keywords":"Lipopolysaccharide; Antigen; Antibody; Chemistry; Immunology; Computational biology; Medicine; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002902785,0.00009999583,0.0003171813,0.0001748838,0.00004424951,0.000001483383,0.0001529575,0.0002122737,0.00028776],"category_scores_gemma":[0.0001652976,0.00007425938,0.0001035472,0.0001324587,0.0002402688,0.00004338644,0.00002418917,0.0001801877,0.00005751999],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001358609,"about_ca_system_score_gemma":0.00003367042,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003091131,"about_ca_topic_score_gemma":0.00004017951,"domain_scores_codex":[0.9988501,0.0002498839,0.0005315932,0.0001538499,0.00001788886,0.0001966682],"domain_scores_gemma":[0.9991128,0.0002074553,0.0003435331,0.0002193808,0.0001105426,0.000006314789],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006242658,0.0001545715,0.004739453,0.000005887549,0.00005525654,3.973992e-7,0.000175045,0.000001680418,0.9683669,0.0009627031,0.0001024686,0.02481142],"study_design_scores_gemma":[0.0006041169,0.0008316256,0.02163633,0.00005613181,0.00002283509,0.00004552878,0.0005551616,0.00001068844,0.967619,0.002070449,0.006467355,0.00008079332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937474,0.002583704,0.0000439072,0.0001198324,0.0008891893,0.0001492312,0.00001096035,0.00001172657,0.002444009],"genre_scores_gemma":[0.9990214,0.0006182374,0.00001501396,0.00003930986,0.00001072799,0.000003761016,0.00009093861,0.000004377409,0.0001962993],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02473063,"threshold_uncertainty_score":0.315077,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007613349277989983,"score_gpt":0.2393921711619059,"score_spread":0.231778821883916,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}