{"id":"W2143718468","doi":"10.1128/jb.00827-08","title":"Frequent Homologous Recombination Events in <i>Mycobacterium tuberculosis</i> PE/PPE Multigene Families: Potential Role in Antigenic Variability","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; World Health Organization","keywords":"Biology; Homologous recombination; Genetics; Gene; Mycobacterium tuberculosis; Homologous chromosome; Antigenic variation; Non-allelic homologous recombination; Recombination; Intergenic region; Virulence; Genome; Genetic recombination; Tuberculosis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003511687,0.0001852922,0.0002740013,0.0004787171,0.0001501606,0.0002839131,0.0001873839,0.0003922889,0.0005137848],"category_scores_gemma":[0.0005721614,0.0001689125,0.0001718718,0.0003719096,0.0002237039,0.0001893237,0.0001950573,0.0003096348,0.000162677],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001876877,"about_ca_system_score_gemma":0.00007936756,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002510968,"about_ca_topic_score_gemma":0.0003392771,"domain_scores_codex":[0.9995911,0.00007675979,0.00002556841,0.0001483407,0.0000741377,0.00008410097],"domain_scores_gemma":[0.9994066,0.0001668657,0.0002637126,0.00005258943,0.00005357861,0.00005666341],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001343994,0.00002117338,0.01074068,0.00003728567,0.00001054291,0.0001211378,0.00005970804,0.00009683073,0.987046,0.00006006059,0.00001489798,0.001657236],"study_design_scores_gemma":[0.00002401041,0.0005158973,0.5057634,0.00001932777,0.00006273471,0.00417828,0.0003332967,0.002563285,0.4834993,0.0004366017,0.002586345,0.0000175213],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975404,0.000359941,0.001669424,0.0000273645,0.000002213851,0.000009623345,0.0001397752,0.0000151162,0.0002361521],"genre_scores_gemma":[0.998207,0.00008841843,0.00121827,0.00002602307,0.000004610672,0.00001261768,0.0002844511,0.00000346838,0.0001551737],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005137848,"threshold_uncertainty_score":0.001857221,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0160020702157658,"score_gpt":0.2842056305689604,"score_spread":0.2682035603531946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}