{"id":"W2144072833","doi":"10.1017/s0024282909990569","title":"Convergent evolution in <i>Cladonia gracilis</i> and allies","year":2010,"lang":"en","type":"article","venue":"The Lichenologist","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Monophyly; Maximum parsimony; Internal transcribed spacer; Phylogenetic tree; Subspecies; Phylogenetics; Cladonia; Evolutionary biology; Botany; Zoology; Genetics; Clade; Gene; Lichen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002753653,0.00008559386,0.0001056952,0.000006894663,0.0001399528,0.0000274858,0.0002122157,0.000124656,0.0002366744],"category_scores_gemma":[0.0000960465,0.00002587009,0.00002499295,0.0001412068,0.0003190113,0.00005264091,0.0001038715,0.0002803188,0.00006906543],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001191845,"about_ca_system_score_gemma":0.000005028387,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001135418,"about_ca_topic_score_gemma":0.02028119,"domain_scores_codex":[0.9993646,0.00005805882,0.0001242809,0.0001739452,0.00006035238,0.0002187363],"domain_scores_gemma":[0.999669,0.0001692421,0.0000400852,0.00006297816,0.00001917917,0.00003955467],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004607092,0.0000979063,0.3777,0.000003929736,0.00001063504,0.000004944427,0.0002928874,0.000001479749,0.5684693,0.04090161,0.0008621257,0.01160908],"study_design_scores_gemma":[0.0001100743,0.00009037821,0.967384,0.000001444554,0.000004585274,0.00001194682,0.0002932656,0.00004074769,0.0008349384,0.006990037,0.02414466,0.00009389836],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9875007,0.0002294628,9.234092e-7,0.009750101,0.0002323198,0.0001234935,0.000008485937,0.00004622218,0.00210833],"genre_scores_gemma":[0.9988369,0.0000627792,0.00002371483,0.0005954044,0.0001265404,0.00001813915,0.000007643685,4.455506e-7,0.0003284232],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.589684,"threshold_uncertainty_score":0.9975961,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008949219329993064,"score_gpt":0.1950634489949725,"score_spread":0.1861142296649795,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}