{"id":"W2144148663","doi":"10.1093/jac/dkm464","title":"Intercontinental emergence of Escherichia coli clone O25:H4-ST131 producing CTX-M-15","year":2007,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":825,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Multilocus sequence typing; Pulsed-field gel electrophoresis; Virulence; Biology; Microbiology; Escherichia coli; Serotype; Phylogenetic tree; Ciprofloxacin; clone (Java method); Pathogenicity island; Typing; Genotype; Genetics; Gene; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004770365,0.0002507946,0.0001945944,0.0007487233,0.0005092167,0.0004973595,0.0002589095,0.0004659609,0.0008592301],"category_scores_gemma":[0.001245294,0.0001266642,0.0001781892,0.0008784885,0.0004382072,0.0002355379,0.0005514341,0.0003318637,0.0001721421],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003519808,"about_ca_system_score_gemma":0.0003604899,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004069001,"about_ca_topic_score_gemma":0.003506858,"domain_scores_codex":[0.9996901,0.00005448193,0.00002621741,0.0000884842,0.00007235582,0.00006843981],"domain_scores_gemma":[0.9988295,0.0001833918,0.0003780202,0.000145659,0.0002872912,0.0001759968],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003385601,0.0001092867,0.9547616,0.00005099968,0.00008931247,0.002233573,0.001355717,0.0002427149,0.02987623,0.0001364384,0.0002235167,0.01058212],"study_design_scores_gemma":[0.00001431385,0.0002379668,0.9903508,0.0000196735,0.0000451278,0.003011102,0.0009881599,0.000248348,0.003689267,0.00004303472,0.00134132,0.00001094851],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994579,0.00006707213,0.0000997812,0.0000177376,0.000006010527,0.000006673216,0.00004379786,0.000003034934,0.0002981585],"genre_scores_gemma":[0.999429,0.00005803213,0.0002185365,0.00002869425,0.000008029751,0.000004584784,0.0001245813,0.000001929489,0.0001265771],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004069001,"threshold_uncertainty_score":0.008090615,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007012317303947851,"score_gpt":0.2534859466118707,"score_spread":0.2464736293079228,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}