{"id":"W2144324631","doi":"10.1128/aem.00257-10","title":"Nonstarch Polysaccharides Modulate Bacterial Microbiota, Pathways for Butyrate Production, and Abundance of Pathogenic <i>Escherichia coli</i> in the Pig Gastrointestinal Tract","year":2010,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":137,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"Deutsche Forschungsgemeinschaft; Alberta Pulse Growers Commission; Deutscher Akademischer Austauschdienst; University of Saskatchewan","keywords":"Biology; Microbiology; Bacteroides; Escherichia coli; Prevotella; Biochemistry; Clostridium; Bacteria; Food science; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002362079,0.000152598,0.0001805571,0.00001067213,0.0001343139,0.00001989818,0.0001432322,0.0000868603,0.00002606205],"category_scores_gemma":[0.000006391301,0.0000671752,0.00003700429,0.0000509025,0.0003721808,0.00003152896,0.00006548126,0.0001760901,0.000001516299],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000770653,"about_ca_system_score_gemma":0.000004774657,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002460962,"about_ca_topic_score_gemma":0.0001045525,"domain_scores_codex":[0.9991335,0.00003015106,0.0002218396,0.0003316245,0.00002471654,0.0002582301],"domain_scores_gemma":[0.9997361,0.00006740027,0.00009321727,0.00006294747,0.000004205979,0.0000361773],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008828512,0.0001621267,0.004597345,0.000008574987,0.000004519375,6.877984e-7,0.0001292508,7.126616e-7,0.9928073,0.0001483207,0.000007106333,0.002045724],"study_design_scores_gemma":[0.0007948618,0.0009457917,0.4243361,0.00002514458,0.00003344548,0.00044145,0.0007106457,0.00002288368,0.5693912,0.0006970984,0.002203881,0.0003975248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985607,0.00006756874,0.000005090545,0.0002809235,0.00008525624,0.0004647004,0.0005081411,0.000006875827,0.00002077021],"genre_scores_gemma":[0.9989169,0.00007466261,0.0005800946,0.0001181513,0.00008924974,0.00003060187,0.0001779846,0.0000019751,0.0000104114],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4234162,"threshold_uncertainty_score":0.2739325,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007843631020646122,"score_gpt":0.1717628361749047,"score_spread":0.1639192051542586,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}