{"id":"W2144440341","doi":"10.1111/jeu.12015","title":"Discovery of a Diverse Clade of Gregarine Apicomplexans (Apicomplexa: Eugregarinorida) from <scp>P</scp>acific Eunicid and Onuphid Polychaetes, Including Descriptions of <i><scp>P</scp>aralecudina</i> n. gen., <i><scp>T</scp>richotokara japonica</i> n. sp., and <i><scp>T</scp>. eunicae</i> n. sp.","year":2013,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Tula Foundation; University of Tsukuba; Canadian Institute for Advanced Research","keywords":"Biology; Clade; Context (archaeology); Phylogenetic tree; Polychaete; Molecular phylogenetics; Phylogenetics; Zoology; Evolutionary biology; Paleontology; Ecology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007633921,0.0009971118,0.002161393,0.0006094215,0.0003939712,0.0001147535,0.001632545,0.0009958977,0.00001998239],"category_scores_gemma":[0.001629893,0.0009578475,0.0007447075,0.0006133033,0.001955433,0.0002016229,0.002100593,0.0011331,0.00001748131],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001199246,"about_ca_system_score_gemma":0.0004121311,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006899625,"about_ca_topic_score_gemma":0.0001650916,"domain_scores_codex":[0.9941675,0.000710153,0.002241226,0.001168539,0.0004264642,0.001286091],"domain_scores_gemma":[0.9927411,0.001843348,0.00290355,0.001168755,0.0008203597,0.0005228631],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006434133,0.0006685577,0.07524247,0.0002919456,0.00121701,0.00006153353,0.001218214,0.00004737985,0.9015433,0.00036246,0.01910663,0.000176132],"study_design_scores_gemma":[0.009867392,0.005457995,0.158872,0.0007697436,0.001767692,0.002386268,0.0100995,0.0001152702,0.7638681,0.002362638,0.0439843,0.0004491036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9708169,0.023506,0.0008088555,0.0001102319,0.0006897447,0.0008647289,0.001656511,0.00002435748,0.001522704],"genre_scores_gemma":[0.985042,0.008220975,0.004107568,0.0004742864,0.0003970889,0.00001605364,0.0004574867,0.00009581947,0.001188689],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1376752,"threshold_uncertainty_score":0.9992872,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02108907423245433,"score_gpt":0.2234392641684853,"score_spread":0.2023501899360309,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}