{"id":"W2144549121","doi":"10.1371/journal.pone.0006577","title":"The Inadequacy of Morphology for Species and Genus Delineation in Microbial Eukaryotes: An Example from the Parabasalian Termite Symbiont Coronympha","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Insect and Arachnid Ecology and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Douglas College; University of British Columbia","funders":"Michael Smith Health Research BC; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Biology; Morphology (biology); Genus; Ecology; Zoology; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001420866,0.00007527637,0.0001098958,0.00001180617,0.0001240636,0.00001121071,0.0001156343,0.0001026605,0.000006682029],"category_scores_gemma":[0.000027509,0.00005051946,0.000026516,0.00002435631,0.0001004987,0.000004615625,0.00002073369,0.00005004349,6.345761e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005655181,"about_ca_system_score_gemma":0.00002366121,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002304105,"about_ca_topic_score_gemma":0.00126361,"domain_scores_codex":[0.9994547,0.00005056162,0.0001640635,0.0001576292,0.0000350794,0.0001379958],"domain_scores_gemma":[0.9996606,0.00004430149,0.00006381138,0.0001716987,0.00004090594,0.00001870121],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002321994,0.0003131486,0.02754888,0.000002900256,0.0000208324,0.000001064572,0.000167287,0.000001131715,0.9681773,0.0001023488,0.0001002864,0.003332656],"study_design_scores_gemma":[0.0009392289,0.0007255345,0.2733843,0.00001467343,0.00006289841,0.000003470832,0.0001680418,0.00008376231,0.7237785,0.0001743346,0.0005602148,0.000105058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987213,0.0003795489,0.0001033117,0.0004370634,0.00003323193,0.0002692285,0.0000388631,0.00000342653,0.00001400953],"genre_scores_gemma":[0.9983754,0.0001845754,0.0004005123,0.0003735048,0.0001976925,0.00002234781,0.0002559773,0.000005025332,0.0001849306],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2458354,"threshold_uncertainty_score":0.2060124,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0507857065041902,"score_gpt":0.2473081490361289,"score_spread":0.1965224425319387,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}