{"id":"W2144743325","doi":"10.1016/j.jmb.2007.09.051","title":"Exploring the Mitochondrial Proteome of the Ciliate Protozoon Tetrahymena thermophila: Direct Analysis by Tandem Mass Spectrometry","year":2007,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":127,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University; York University","funders":"","keywords":"Biology; Tetrahymena; Biochemistry; Proteome; Chaperonin; Mitochondrial ribosome; Mitochondrion; Mitochondrial carrier; Bacterial outer membrane; Ribosome; Gene; RNA; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009218761,0.0002460578,0.0001650604,0.0002315603,0.0003467409,0.0002791021,0.0001854725,0.0003651645,0.0005435383],"category_scores_gemma":[0.0001558563,0.0001207372,0.0001895892,0.000204244,0.0001320427,0.0002990219,0.000249944,0.0002991519,0.0002905792],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001695927,"about_ca_system_score_gemma":0.0001615115,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001127865,"about_ca_topic_score_gemma":0.001820551,"domain_scores_codex":[0.9999561,0.00000321127,0.000002294418,0.00001428667,0.00001587483,0.00000829723],"domain_scores_gemma":[0.99993,0.000009996146,0.00001568253,0.00000644111,0.00002178498,0.00001601452],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004769925,0.000003910534,0.0007904026,0.00002752829,0.00000650462,0.00004028545,0.00002267399,0.00002093541,0.9981841,0.00002906125,0.00002846186,0.0007982909],"study_design_scores_gemma":[0.00003221198,0.0003260277,0.1797981,0.00003263305,0.0001175935,0.002044595,0.0005219665,0.003789477,0.8055359,0.0004026637,0.007373987,0.00002470412],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950611,0.001262675,0.002075287,0.0001272379,0.00001126255,0.000009950908,0.0008684346,0.00002964588,0.0005544732],"genre_scores_gemma":[0.9908563,0.001317539,0.004449365,0.00007849508,0.00001398781,0.00001171211,0.00177894,0.00002410544,0.001469678],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001127865,"threshold_uncertainty_score":0.002242565,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0162788965952387,"score_gpt":0.2464325439118726,"score_spread":0.2301536473166339,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}