{"id":"W2144837305","doi":"10.1099/vir.0.011569-0","title":"Phylogeography and molecular epidemiology of hepatitis C virus genotype 2 in Africa","year":2009,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Université de Sherbrooke","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Phylogeography; Biology; Virology; Genotype; Molecular epidemiology; Epidemiology; Hepatitis a virus; Virus; Phylogenetics; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000854453,0.0001786339,0.000228535,0.002102919,0.0004860448,0.0006390553,0.0001598738,0.0002526129,0.0006605306],"category_scores_gemma":[0.002538325,0.0001618677,0.0001849628,0.001886862,0.0005301698,0.0004161665,0.0004569222,0.0003209604,0.00007465661],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004264383,"about_ca_system_score_gemma":0.0002740099,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008223698,"about_ca_topic_score_gemma":0.008272349,"domain_scores_codex":[0.9995864,0.0002426784,0.00001294436,0.00006018404,0.00003061373,0.00006715782],"domain_scores_gemma":[0.9992608,0.0003412418,0.0002559964,0.00004613711,0.00004350941,0.00005233333],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000215885,0.00003063051,0.9699256,0.00003307308,0.00009744898,0.0003180111,0.001565476,0.004554493,0.005397586,0.001160959,0.0001143427,0.01658652],"study_design_scores_gemma":[0.000009792575,0.00004423111,0.9918234,0.00003624164,0.00002036828,0.0003665967,0.0008089279,0.005657666,0.0001710484,0.000399176,0.0006525184,0.000009997151],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993576,0.0001746434,0.000214753,0.00004648077,6.379847e-7,0.000002490857,0.00003341454,0.000001115502,0.0001689546],"genre_scores_gemma":[0.9993956,0.0002405759,0.0002520313,0.00001001326,0.000002964122,0.000003031834,0.00006120472,0.00000130491,0.0000332882],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008223698,"threshold_uncertainty_score":0.0163517,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03278205486786872,"score_gpt":0.3298147530354242,"score_spread":0.2970326981675555,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}