{"id":"W2145032579","doi":"10.1128/cvi.00380-13","title":"Novel Secreted Antigens of Mycobacterium paratuberculosis as Serodiagnostic Biomarkers for Johne's Disease in Cattle","year":2013,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Beef Producers; U.S. Department of Agriculture","keywords":"Paratuberculosis; Mycobacterium avium subsp. paratuberculosis; Antigen; Microbiology; Virology; Biology; Mycobacterium; Disease; Immunology; Medicine; Bacteria; Pathology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003530597,0.0001944953,0.0007079548,0.0001912975,0.00004229691,0.00001659002,0.0001254784,0.0002070743,0.0004435724],"category_scores_gemma":[0.004563758,0.0001549558,0.0001908916,0.0002400406,0.0001842179,0.0001014943,0.0001263696,0.0002561506,0.00007261242],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001737164,"about_ca_system_score_gemma":0.0001777225,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00115131,"about_ca_topic_score_gemma":0.00005446376,"domain_scores_codex":[0.9981061,0.0001077242,0.0007916294,0.0004317995,0.00009625064,0.000466448],"domain_scores_gemma":[0.9968333,0.001995575,0.000127015,0.0003975688,0.0002556086,0.000390888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002247507,0.0008850977,0.9686968,0.00023823,0.0003011555,0.00001132214,0.00002745486,4.401941e-7,0.02166504,0.00005915304,0.003078065,0.00278976],"study_design_scores_gemma":[0.005769399,0.001579261,0.9896596,0.000151681,0.000128466,0.00001502998,0.00004111666,0.0001706709,0.001088235,0.0002555705,0.0009890903,0.0001518677],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9906632,0.001126023,0.0000422061,0.006607962,0.0002715747,0.001094641,0.00008467055,0.00002551401,0.00008421524],"genre_scores_gemma":[0.9948354,0.00366421,0.0002670372,0.0005731229,0.0001168135,0.0002523242,0.0001649042,0.00002253107,0.0001036665],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02096284,"threshold_uncertainty_score":0.6318915,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03262689186411423,"score_gpt":0.3477206022848628,"score_spread":0.3150937104207486,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}