{"id":"W2145169218","doi":"10.1534/genetics.109.104778","title":"Signature of Diversifying Selection on Members of the Pentatricopeptide Repeat Protein Family in <i>Arabidopsis lyrata</i>","year":2009,"lang":"en","type":"article","venue":"Genetics","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; York University","funders":"","keywords":"Pentatricopeptide repeat; Biology; Genetics; Selection (genetic algorithm); Arabidopsis; Signature (topology); Evolutionary biology; Gene; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001124519,0.0001300977,0.0001812321,0.0003390829,0.000134947,0.0001750574,0.0001114362,0.0001565654,0.0004651069],"category_scores_gemma":[0.0002037148,0.00009644283,0.00009783353,0.0001785968,0.0002157854,0.00007824821,0.0001564299,0.0002533974,0.00009808705],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000153589,"about_ca_system_score_gemma":0.00009811437,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004062354,"about_ca_topic_score_gemma":0.0007749135,"domain_scores_codex":[0.9999113,0.00001450701,0.000006001704,0.00003166586,0.00002101842,0.00001554812],"domain_scores_gemma":[0.9996953,0.00004843079,0.0001350396,0.00002121316,0.00002334612,0.00007668577],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001186387,0.00001468842,0.01532286,0.00001347515,0.00001415182,0.00009669051,0.00003597355,0.00007291945,0.9825618,0.00004452047,0.00001838068,0.001685776],"study_design_scores_gemma":[0.0000162306,0.0001867467,0.9512218,0.000005122378,0.00003351474,0.001264249,0.00009933527,0.001190946,0.04540727,0.0001121442,0.0004497849,0.0000128317],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999644,0.00005426506,0.0001291604,0.000006886808,7.514648e-7,0.000001336086,0.00003557076,0.000006273997,0.0001218388],"genre_scores_gemma":[0.9994585,0.0000314558,0.0002397004,0.00001679876,0.000002247533,0.000003528788,0.0001334953,0.000005798336,0.0001084945],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0004651069,"threshold_uncertainty_score":0.00155592,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01825373924625551,"score_gpt":0.2306782426469829,"score_spread":0.2124245034007274,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}