{"id":"W2145433078","doi":"10.1093/bioinformatics/btm169","title":"Polyploids, genome halving and phylogeny","year":2007,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Genome; Polyploid; Ploidy; Phylogenetics; Biology; Evolutionary biology; Genomics; Genome evolution; Computational biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001430706,0.0003932111,0.0007056043,0.0006726647,0.0007915454,0.001377744,0.001174512,0.0008635322,0.002778478],"category_scores_gemma":[0.005848103,0.0003071809,0.0003737927,0.001255083,0.001785247,0.002559787,0.001183381,0.001477798,0.0003006869],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001144507,"about_ca_system_score_gemma":0.0007942503,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002448211,"about_ca_topic_score_gemma":0.002181635,"domain_scores_codex":[0.9995626,0.0001429856,0.00002430355,0.0001538587,0.00008359489,0.00003261806],"domain_scores_gemma":[0.9973361,0.001724218,0.000387389,0.000197555,0.0001827442,0.000172003],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0002213292,0.00008991609,0.01309498,0.0005744763,0.00009203996,0.0001935145,0.0003586827,0.3305735,0.008533091,0.3478149,0.004728062,0.2937256],"study_design_scores_gemma":[0.00003637809,0.0001006736,0.004374786,0.00006339583,0.00003548859,0.0004268848,0.0001881449,0.3781662,0.005842743,0.6001042,0.01062129,0.00003983208],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1042371,0.004759753,0.8821188,0.002864717,0.0000676389,0.0000407117,0.0001937951,0.0007148681,0.005002616],"genre_scores_gemma":[0.5415196,0.001983954,0.4533552,0.0003705463,0.00009942435,0.0000602976,0.0004322489,0.0002068413,0.001971806],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.002778478,"threshold_uncertainty_score":0.009294927,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01401655706025646,"score_gpt":0.2045900186355054,"score_spread":0.1905734615752489,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}