{"id":"W2145945613","doi":"10.1086/605892","title":"Genomewide Association Study of a Rapid Progression Cohort Identifies New Susceptibility Alleles for AIDS (ANRS Genomewide Association Study 03)","year":2009,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre; McGill Genome Centre","funders":"","keywords":"Genome-wide association study; Single-nucleotide polymorphism; Odds ratio; Genetic association; Genetics; Biology; Haplotype; Allele; Disease; Medicine; Genotype; Gene; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003017602,0.000192382,0.0004969494,0.0001054189,0.0002448085,0.00003429982,0.0002561227,0.0001503176,0.00001502504],"category_scores_gemma":[0.002619709,0.0001418123,0.0002595904,0.0001725864,0.00002319937,0.00001804033,0.00005925207,0.0001467882,0.000001677951],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000298174,"about_ca_system_score_gemma":0.0002199598,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001467169,"about_ca_topic_score_gemma":0.0003873747,"domain_scores_codex":[0.9972895,0.000885456,0.0009027381,0.0002199362,0.0004100858,0.0002923169],"domain_scores_gemma":[0.9964719,0.0003615092,0.001919326,0.0003040105,0.0008300324,0.0001131822],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002775761,0.002076994,0.9799386,0.00001160931,0.000927959,6.617906e-7,0.0007797775,0.0008942977,0.009337777,0.000001429804,0.002954892,0.002798413],"study_design_scores_gemma":[0.002298046,0.008789351,0.9842557,0.00001211738,0.0009317318,0.000002919202,0.002109003,0.00001344095,0.0004362625,0.0007484543,0.0002593633,0.0001435701],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965061,0.001163454,0.0005695505,0.0002491717,0.0002571192,0.001167405,0.00002462703,0.00001185811,0.00005072692],"genre_scores_gemma":[0.9985414,0.0003766228,0.0000841911,0.0001081362,0.0004898458,0.00002151187,0.00002891779,0.00001524759,0.0003340858],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008901515,"threshold_uncertainty_score":0.5782939,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009998180921594074,"score_gpt":0.2942505568525577,"score_spread":0.2842523759309636,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}