{"id":"W2145951154","doi":"10.1128/aem.01330-06","title":"Characterization of Environmental Sources of the Human and Animal Pathogen <i>Cryptococcus gattii</i> in British Columbia, Canada, and the Pacific Northwest of the United States","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":236,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; British Columbia Lung Association","keywords":"Cryptococcus gattii; Colonization; Biology; Ecology; Cryptococcosis; Outbreak; Propagule; Veterinary medicine; Microbiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005693556,0.00006857816,0.0001994698,0.00001219731,0.0001289105,0.000004865219,0.00003512556,0.00004227197,0.00001439743],"category_scores_gemma":[9.63358e-7,0.00005057168,0.0000211042,0.00004319522,0.001160728,0.000008258502,0.00009712816,0.00007210256,4.43518e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002096893,"about_ca_system_score_gemma":0.000006761402,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.2661566,"about_ca_topic_score_gemma":0.3971063,"domain_scores_codex":[0.9995053,0.00003916119,0.0002110794,0.0001197577,0.00003364331,0.00009101898],"domain_scores_gemma":[0.9997467,0.00003387085,0.0001195107,0.00008664573,0.000001537739,0.00001173094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001078128,0.00003951532,0.4842726,0.00001187972,0.00001216832,2.947455e-7,0.0001129763,0.000001010061,0.5154542,0.000006878382,0.00000714967,0.00007053321],"study_design_scores_gemma":[0.001019693,0.00005502641,0.9849213,0.00001716685,0.00003749918,0.00004172283,0.001071512,0.000002726141,0.01221553,0.00001834346,0.0005522809,0.00004723642],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984781,0.0002225369,2.142907e-7,0.00006312694,0.00001365026,0.0003651219,0.0008261619,0.000001158522,0.00002994393],"genre_scores_gemma":[0.9993137,0.0003278785,0.000002463188,0.00007582832,0.000008291519,0.0000140168,0.0002054493,0.000005619539,0.00004673038],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5032387,"threshold_uncertainty_score":0.7387302,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.001933022146870006,"score_gpt":0.1424816761762544,"score_spread":0.1405486540293844,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}