{"id":"W2145994037","doi":"10.1128/aem.02636-10","title":"Investigation of Genotypes of Borrelia burgdorferi in Ixodes scapularis Ticks Collected during Surveillance in Canada","year":2011,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases","keywords":"Ixodes scapularis; Borrelia burgdorferi; Lyme disease; Biology; Tick; Multilocus sequence typing; Ixodes; Borrelia; Virology; Genetic diversity; Genotype; Ixodidae; Genetics; Population; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006430355,0.0001355104,0.0003195153,0.00009998149,0.00002865031,7.311847e-7,0.00008406915,0.0001389176,0.0001941059],"category_scores_gemma":[0.000007652162,0.0001378205,0.00001939709,0.00009925177,0.000334497,0.00001841314,0.00007112119,0.0001178515,0.000005294468],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001493399,"about_ca_system_score_gemma":0.00009302852,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.3195549,"about_ca_topic_score_gemma":0.3628069,"domain_scores_codex":[0.9991046,0.00008601676,0.0003434567,0.0002336653,0.00001111398,0.0002212142],"domain_scores_gemma":[0.9996728,0.00004999455,0.0001316507,0.0001252879,0.000003656233,0.00001662128],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007935941,0.00002876718,0.4553407,0.00001568467,0.00002322575,0.000001597702,0.0002256906,0.000006200532,0.5441911,0.00002141287,0.00001110328,0.00005518266],"study_design_scores_gemma":[0.0006667527,0.00003393522,0.6320263,0.000008166307,0.000005953829,0.00001532042,0.0002201094,6.399533e-7,0.3668804,0.00004179002,0.0000172234,0.00008345215],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983769,0.001078832,0.000001608579,0.000005311093,0.00007284572,0.000188199,0.0001308494,0.000006207053,0.0001392413],"genre_scores_gemma":[0.9995696,0.0001562604,0.00002704665,0.0000264359,0.000002562423,0.00001668031,0.0001756986,0.000009902205,0.0000157941],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1773107,"threshold_uncertainty_score":0.6849763,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005385100699291642,"score_gpt":0.1452156770966803,"score_spread":0.1398305763973886,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}