{"id":"W2146032889","doi":"10.1093/intimm/dxh245","title":"Novel simian immunodeficiency virus CTL epitopes restricted by MHC class I molecule Mamu-B*01 are highly conserved for long term in DNA/MVA-vaccinated, SHIV-challenged rhesus macaques","year":2005,"lang":"en","type":"article","venue":"International Immunology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Epitope; Virology; CTL*; Simian immunodeficiency virus; Biology; MHC class I; Modified vaccinia Ankara; Virus; Vaccinia; Immunology; Immune system; Major histocompatibility complex; Antibody; CD8; Genetics; Recombinant DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008378876,0.0001314179,0.0001139699,0.0001068293,0.0001310754,0.0001627341,0.00007824717,0.0001618883,0.0005189476],"category_scores_gemma":[0.0001209864,0.000053984,0.0001015916,0.00004524703,0.000127839,0.0001099494,0.000104547,0.0002851798,0.0001238153],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000981008,"about_ca_system_score_gemma":0.00008199537,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000324102,"about_ca_topic_score_gemma":0.0004192461,"domain_scores_codex":[0.9999571,0.000004140617,0.000003723729,0.00001210834,0.000009196019,0.00001376671],"domain_scores_gemma":[0.9999338,0.00000905359,0.00001763458,0.000008910466,0.00001100721,0.00001953853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006601297,0.00001281527,0.003413762,0.00001437325,0.000003431473,0.00009948212,0.00005146065,0.00002060633,0.9953804,0.0000222111,0.000009428084,0.000905983],"study_design_scores_gemma":[0.00002106458,0.001838242,0.2983253,0.00003017911,0.00006292207,0.004357893,0.0005419775,0.001569932,0.6886586,0.0002073568,0.004374496,0.000012076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993815,0.0002244691,0.0001895871,0.000008412196,0.00000236149,0.000003655784,0.00003014845,0.000004196188,0.0001555753],"genre_scores_gemma":[0.9990165,0.0001076394,0.0003123003,0.00001479041,0.000003094284,0.00000825148,0.0001266522,0.000001911998,0.000408853],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005189476,"threshold_uncertainty_score":0.001736045,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02149969177962037,"score_gpt":0.2869618998746483,"score_spread":0.265462208095028,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}