{"id":"W2146168891","doi":"10.1128/mbio.01864-14","title":"Evolution of Invasion in a Diverse Set of <i>Fusobacterium</i> Species","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; National Human Genome Research Institute; U.S. Public Health Service","keywords":"Biology; Fusobacterium nucleatum; Fusobacterium; Gene; Bacterial adhesin; Genome; Commensalism; Genetics; Microbiology; Bacteria; Virulence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001134766,0.00004677781,0.00009395196,0.00003241831,0.00001080603,0.00000139947,0.00006514332,0.00006849597,0.00001612764],"category_scores_gemma":[0.00002519133,0.0000445398,0.00003118407,0.00005136819,0.00004396009,0.000001389235,0.00005368166,0.00002874631,0.000003723736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001240428,"about_ca_system_score_gemma":0.00003208633,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001672468,"about_ca_topic_score_gemma":0.0002952008,"domain_scores_codex":[0.9996074,0.00003260918,0.0001327471,0.0001029262,0.00003605785,0.00008821826],"domain_scores_gemma":[0.9997419,0.000003636915,0.00006326677,0.0001403205,0.00003167672,0.0000191599],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003188114,0.00002499133,0.05236599,0.00004231698,0.000002342531,1.150994e-7,0.00005723318,0.000003092591,0.9463599,0.0001594539,0.0007622502,0.0001904883],"study_design_scores_gemma":[0.0004902309,0.0002436211,0.3712596,0.00003095215,0.000004268753,0.00000183765,0.0001144165,0.000009229429,0.6090387,0.00005324717,0.01868824,0.00006570747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986487,0.00009171138,0.0001291716,0.00004654695,0.00005746767,0.00005639137,0.00002200664,0.000001670082,0.0009463378],"genre_scores_gemma":[0.9994878,0.00004930824,0.0001539065,0.00004104479,0.00004671935,8.780776e-7,0.00004565178,0.000003573323,0.0001711598],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3373212,"threshold_uncertainty_score":0.181628,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01272151830951277,"score_gpt":0.2308227352200843,"score_spread":0.2181012169105716,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}