{"id":"W2146264981","doi":"10.1128/jcm.01309-07","title":"Novel Multiplex PCR Assay for Simultaneous Identification of Community-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> Strains USA300 and USA400 and Detection of <i>mecA</i> and Panton-Valentine Leukocidin Genes, with Discrimination of <i>Staphylococcus aureus</i> from Coagulase-Negative Staphylococci","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":113,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Staphylococcus aureus; Leukocidin; Panton–Valentine leukocidin; Microbiology; Multiplex; Biology; Multiplex polymerase chain reaction; Staphylococcal infections; Micrococcaceae; Coagulase; Methicillin-resistant Staphylococcus aureus; Virology; Polymerase chain reaction; Bacteria; Gene; Staphylococcus; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001010353,0.001132158,0.0007480768,0.001090714,0.0001983388,0.0006953494,0.0008996067,0.001066452,0.001008805],"category_scores_gemma":[0.001385398,0.0006031276,0.0004171517,0.0003803625,0.0003404001,0.0006646411,0.0005293468,0.001012623,0.0007447217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005145714,"about_ca_system_score_gemma":0.0003827079,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003415636,"about_ca_topic_score_gemma":0.0006014337,"domain_scores_codex":[0.9984547,0.0002399937,0.0001262333,0.0005264244,0.000511784,0.0001407657],"domain_scores_gemma":[0.9988059,0.0003415165,0.0002639001,0.00007375808,0.0003357824,0.0001792558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002672776,0.0002388323,0.001975911,0.0001052029,0.00002249185,0.0001439348,0.00006671553,0.0002889899,0.9737746,0.0002010069,0.0003422084,0.02257291],"study_design_scores_gemma":[0.0001422718,0.00218343,0.004988507,0.00004723093,0.000125997,0.004341392,0.00008743084,0.01838901,0.9612461,0.000273533,0.008082421,0.00009262814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5836203,0.005451304,0.399554,0.0006635268,0.000826632,0.001033098,0.001276441,0.002927409,0.004647263],"genre_scores_gemma":[0.5674652,0.00192654,0.4210603,0.0005376522,0.0002323847,0.0007386664,0.001711911,0.00006903755,0.006258208],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001132158,"threshold_uncertainty_score":0.005343378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04893954469295651,"score_gpt":0.3427170446724739,"score_spread":0.2937774999795174,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}