{"id":"W2146394896","doi":"10.1128/ec.00122-14","title":"The Underlying Structure of Adaptation under Strong Selection in 12 Experimental Yeast Populations","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Adaptation (eye); Genetics; Population; Sexual reproduction; Selection (genetic algorithm); Evolutionary biology; Mutation; Asexual reproduction; Local adaptation; Gene; Allele; Mutant; Experimental evolution","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006088105,0.0000665467,0.00005256521,0.00002396305,0.00007616189,0.00001023463,0.00006478756,0.00005937979,0.0000136054],"category_scores_gemma":[0.00001185824,0.00005797077,0.00002892366,0.00005682732,0.00003469793,0.000002570758,0.00002303371,0.00005187831,0.000001513418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002242534,"about_ca_system_score_gemma":0.00002920083,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005157865,"about_ca_topic_score_gemma":0.001519127,"domain_scores_codex":[0.9994889,0.00005540427,0.0001426385,0.0001237993,0.00007926228,0.0001100241],"domain_scores_gemma":[0.9997891,0.000007351009,0.00005957094,0.00009862316,0.0000222169,0.00002312821],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003963996,0.0000837803,0.03315829,0.00001118231,0.00001169933,7.161689e-8,0.000183968,0.2196088,0.7409729,0.004665867,0.0001662476,0.001097591],"study_design_scores_gemma":[0.001009174,0.0003041135,0.7233149,0.00001142099,0.00001642914,0.000005828075,0.001983866,0.2057216,0.06592989,0.001131547,0.0003506731,0.0002204723],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9538107,0.0001715554,0.04477455,0.00003419741,0.0001208964,0.00009403537,0.000003341242,0.000004679856,0.0009860726],"genre_scores_gemma":[0.9983206,0.000007922681,0.001136003,0.00002673723,0.0000429128,0.000001946388,0.00005789469,0.000008980611,0.0003969956],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6901567,"threshold_uncertainty_score":0.2363979,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0214834329746962,"score_gpt":0.2686801023336811,"score_spread":0.2471966693589849,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}