{"id":"W2146802484","doi":"10.4028/www.scientific.net/amr.393-395.955","title":"Study of RNA Secondary Structure Prediction Algorithms","year":2011,"lang":"en","type":"article","venue":"Advanced materials research","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Protein secondary structure; Nucleic acid secondary structure; RNA; Algorithm; Computer science; Physics; Biology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005746641,0.0001024906,0.0001553322,0.00007194982,0.00008715507,0.00001277268,0.0002427763,0.0001154066,0.0005229429],"category_scores_gemma":[0.00009443752,0.00008944969,0.00002167405,0.00008866173,0.00006093211,0.000008049993,0.0001608779,0.0000814075,0.000007139211],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008024024,"about_ca_system_score_gemma":0.00004618612,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005353641,"about_ca_topic_score_gemma":0.00001532551,"domain_scores_codex":[0.9986364,0.0002859627,0.0002568897,0.0003065928,0.0002642658,0.0002499357],"domain_scores_gemma":[0.9992592,0.00001132942,0.00007172993,0.0004191838,0.000183929,0.00005465167],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003112598,0.0001187495,0.00005463271,0.0000251051,0.00003244371,0.000004805107,0.0002742907,0.000002157305,0.9873452,0.00004616245,0.00005139245,0.01173385],"study_design_scores_gemma":[0.0005229419,0.00166782,0.00134823,0.00001118565,0.000004901676,0.000004925897,0.0006780048,3.060849e-7,0.993773,0.00115097,0.0007583475,0.00007930039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976774,0.0001387998,0.0001855002,0.00000423349,0.0002650526,0.0005627256,0.0001284976,0.000009983186,0.001027758],"genre_scores_gemma":[0.9966619,0.000100903,0.002680151,0.000006712127,0.0001355342,0.00007485287,0.00004123676,0.00002314715,0.0002755905],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01165455,"threshold_uncertainty_score":0.5725858,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0520161259890765,"score_gpt":0.3324147927158992,"score_spread":0.2803986667268227,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}