{"id":"W2146873558","doi":"10.3201/eid1604.091435","title":"Livestock-associated Methicillin-Resistant<i>Staphylococcus aureus</i>Sequence Type 398 in Humans, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Sciences Centre; Saskatchewan Disease Control Laboratory; Royal University Hospital; Public Health Agency of Canada; Sunnybrook Health Science Centre; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"SCCmec; Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Biology; Livestock; Microbiology; Population; Panton–Valentine leukocidin; Staphylococcal infections; Leukocidin; Palindromic sequence; Veterinary medicine; Virology; Palindrome; Medicine; Gene; Genetics; Genome; Bacteria; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002770696,0.0004387894,0.0006462967,0.0003068013,0.0003172499,0.0000580312,0.0002706018,0.0002302533,0.0005077735],"category_scores_gemma":[0.002493903,0.0004443356,0.0001806553,0.001117178,0.0002674899,0.0001446932,0.00008193255,0.001050331,0.00003301692],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006341231,"about_ca_system_score_gemma":0.00233098,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.2276824,"about_ca_topic_score_gemma":0.7897124,"domain_scores_codex":[0.9971501,0.0001284773,0.0006175278,0.0006613536,0.0006302292,0.0008123642],"domain_scores_gemma":[0.997852,0.0003220645,0.0002603467,0.0006804764,0.0004572042,0.0004279254],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002716809,0.0005822509,0.6933271,0.0001929397,0.0001789054,0.0006218374,0.0002065912,0.0002157796,0.2862013,0.0007165414,0.01693904,0.0005460361],"study_design_scores_gemma":[0.003207311,0.0004318905,0.9400357,0.0006676379,0.0004495078,0.000006362497,0.0002696647,0.000173147,0.005159984,0.0008779947,0.04744813,0.001272663],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929177,0.0007589271,0.00002252879,0.0006428061,0.001259611,0.0006490072,0.0001795277,0.000315862,0.003254064],"genre_scores_gemma":[0.9973535,0.0001137911,0.0000901626,0.001291124,0.0002514366,0.00005448847,0.0001074105,0.00008460756,0.0006535045],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.56203,"threshold_uncertainty_score":0.9998009,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0136515941440723,"score_gpt":0.2796928386171312,"score_spread":0.2660412444730589,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}