{"id":"W2147155679","doi":"10.1089/088922203322493094","title":"HIV Type 1 C and C′ Subclusters Based on Long Terminal Repeat Sequences in the Ethiopian HIV Type 1 Subtype C Epidemic","year":2003,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Biology; Long terminal repeat; Genotype; Recombinant DNA; Genetics; Sequence (biology); Human immunodeficiency virus (HIV); Virology; Gene; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002279565,0.0001946705,0.0002598569,0.0004121688,0.0006537677,0.0001016816,0.000282283,0.0001904901,0.0004762677],"category_scores_gemma":[0.001078408,0.0001269434,0.00003369784,0.0004823464,0.001056483,0.0001045783,0.00006822697,0.0009612695,0.0004790896],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008485457,"about_ca_system_score_gemma":0.0002349443,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004659092,"about_ca_topic_score_gemma":0.0006164172,"domain_scores_codex":[0.9966086,0.001663539,0.0002341313,0.0004718679,0.0002020163,0.0008198408],"domain_scores_gemma":[0.9981117,0.001169236,0.00004213515,0.0004249081,0.0001576768,0.00009439464],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007582814,0.0002314528,0.9779227,0.00005883197,0.00006631317,0.0003181911,0.0005865199,0.000001894931,0.005470153,0.004923509,0.008540297,0.001121851],"study_design_scores_gemma":[0.006835249,0.02024807,0.881447,0.0004174101,0.00005876098,0.0003199119,0.003062744,0.000007840898,0.01221288,0.003306777,0.07132341,0.0007599719],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910926,0.00231785,0.000003438575,0.0005314456,0.00007560839,0.0003989037,0.00002781749,0.00002206418,0.005530252],"genre_scores_gemma":[0.9941263,0.0004115453,0.00003863238,0.0002643872,0.00002435278,0.00003085141,0.00009592323,0.0000158315,0.004992188],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09647574,"threshold_uncertainty_score":0.6157887,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0871000173612467,"score_gpt":0.3704578747017495,"score_spread":0.2833578573405028,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}