{"id":"W2147172531","doi":"10.1128/jcm.43.6.2844-2849.2005","title":"Community-Wide Outbreaks of Clonally Related CTX-M-14 β-Lactamase-Producing <i>Escherichia coli</i> Strains in the Calgary Health Region","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":141,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"University of Calgary","keywords":"Pulsed-field gel electrophoresis; Biology; Escherichia coli; Microbiology; Molecular epidemiology; Outbreak; Enterobacteriaceae; Genotype; Restriction enzyme; DNA profiling; Genetics; Virology; Gene; DNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005370123,0.0001818992,0.0007247475,0.00006464135,0.00008555517,0.00001118663,0.0007123951,0.0004293848,0.00001036119],"category_scores_gemma":[0.001671075,0.0001296649,0.0003196411,0.0001369018,0.0004605991,0.000009553715,0.0001060897,0.001315349,0.000003154496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003515518,"about_ca_system_score_gemma":0.0005017836,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004901431,"about_ca_topic_score_gemma":0.0003780714,"domain_scores_codex":[0.9944438,0.002623757,0.002312727,0.0002268616,0.00007519696,0.0003176647],"domain_scores_gemma":[0.9969949,0.0004478679,0.001714507,0.0005455648,0.0002048422,0.00009236489],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001623094,0.001486341,0.1405521,0.00009829157,0.0003119333,0.0000472092,0.0008381595,0.00009861295,0.8258776,0.0001784349,0.02225095,0.006637246],"study_design_scores_gemma":[0.00608781,0.006120766,0.853337,0.0005224679,0.0001078271,0.001538635,0.0009979983,0.00001737684,0.02169133,0.0004268966,0.1086256,0.0005262814],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9915306,0.0008720719,0.0002842574,0.006340134,0.0004021946,0.0001770898,0.00001148557,0.000003428136,0.0003787501],"genre_scores_gemma":[0.9916435,0.0007499167,0.002525913,0.004549818,0.0003398886,6.642529e-7,0.00004467716,0.00001950012,0.0001261268],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8041863,"threshold_uncertainty_score":0.5714608,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03498224818688547,"score_gpt":0.335422607472777,"score_spread":0.3004403592858915,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}