{"id":"W2147757322","doi":"10.1046/j.1365-294x.2003.01774.x","title":"Ancestral polymorphisms in genetic markers obscure detection of evolutionarily distinct populations in the endangered Florida grasshopper sparrow (<i>Ammodramus savannarum floridanus</i>)","year":2003,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum; McMaster University","funders":"","keywords":"Biology; Subspecies; Evolutionary biology; Microsatellite; Population; Coalescent theory; Endangered species; Zoology; Mitochondrial DNA; Genetic diversity; Genetic variation; Conservation genetics; Phylogenetic tree; Genetics; Ecology; Allele; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003018088,0.0001952286,0.0002215389,0.0001455008,0.00008703772,0.00001285093,0.0002429337,0.0002982923,0.00004301572],"category_scores_gemma":[0.000160052,0.0001872034,0.0001351155,0.0003358712,0.0001477632,0.000007323074,0.00004509775,0.0001918204,0.000004480203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004108295,"about_ca_system_score_gemma":0.00009376866,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001837535,"about_ca_topic_score_gemma":0.005113407,"domain_scores_codex":[0.9981747,0.0005043545,0.0004044386,0.0003953135,0.0001734038,0.0003478102],"domain_scores_gemma":[0.9993401,0.00001904226,0.0001455942,0.000376294,0.00006215097,0.00005686316],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001100845,0.00008577772,0.9077551,0.00001272123,0.00002740991,0.00004117564,0.00012525,0.00873377,0.08176643,0.0003749773,0.0001902162,0.0007770975],"study_design_scores_gemma":[0.0008195452,0.0002134521,0.9859929,0.000004517446,0.00003035962,0.00006125812,0.0001221601,0.0001221526,0.00921038,0.000925649,0.002303776,0.0001938637],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994284,0.0006257814,0.003373443,0.0001849456,0.0007617143,0.0003554673,0.00003027384,0.00000624573,0.0003781261],"genre_scores_gemma":[0.9985465,0.00002230819,0.0009499016,0.0002021668,0.00006029439,0.00002988653,0.0001168268,0.00001533008,0.00005681478],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0782378,"threshold_uncertainty_score":0.7633932,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01635619056158693,"score_gpt":0.2339988196461696,"score_spread":0.2176426290845827,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}