{"id":"W2147765731","doi":"10.3389/fmicb.2011.00090","title":"The Evolution of Virulence in Non-O157 Shiga Toxin-Producing Escherichia Coli","year":2011,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Winnipeg; Public Health Agency of Canada; McMaster University","funders":"","keywords":"Virulence; Serotype; Biology; Outbreak; Shiga toxin; Diarrhea; Disease; Escherichia coli; Microbiology; Whole genome sequencing; Virology; Genome; Genetics; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000657925,0.0001443182,0.0002322408,0.00008994102,0.00007375837,0.000004640051,0.0004322541,0.0001772931,0.000004542431],"category_scores_gemma":[0.0003032745,0.0001173268,0.00005492493,0.00026518,0.0004797878,0.000004822651,0.0002757588,0.0002143181,0.000002996378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001012356,"about_ca_system_score_gemma":0.0001319504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004068132,"about_ca_topic_score_gemma":0.0009321767,"domain_scores_codex":[0.9986151,0.0002094129,0.0003124528,0.0003849968,0.00004243129,0.000435567],"domain_scores_gemma":[0.9993809,0.00002180579,0.0001053856,0.0003880031,0.00007379838,0.00003014657],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002103997,0.00005944675,0.1184903,0.00001671589,0.00003661176,0.000002258094,0.0003541426,0.00001016663,0.877323,0.00004631035,0.002943174,0.000507537],"study_design_scores_gemma":[0.001631173,0.0008277801,0.3012643,0.00008606162,0.00001705903,0.000009257352,0.003493568,0.0002261987,0.6796992,0.0009262367,0.0113066,0.0005125114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914259,0.004716443,0.002075816,0.00007035682,0.0005200023,0.000304048,0.00001021795,0.000004506115,0.0008727554],"genre_scores_gemma":[0.9919652,0.0008711538,0.006694271,0.0000616815,0.00005052,0.0000566293,0.00001070347,0.00001366026,0.0002761224],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1976237,"threshold_uncertainty_score":0.4784447,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009048908535234464,"score_gpt":0.2329408109051337,"score_spread":0.2238919023698992,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}