{"id":"W2147953342","doi":"10.1645/ge-2706.1","title":"Detection and Differentiation of Coccidian Oocysts by Real-Time PCR and Melting Curve Analysis","year":2011,"lang":"en","type":"article","venue":"Journal of Parasitology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Biology; Coccidia; Cyclospora cayetanensis; Cryptosporidium; Eimeria acervulina; Isospora; Melting curve analysis; Eimeria; Virology; Polymerase chain reaction; Cyclospora; Real-time polymerase chain reaction; Enterocytozoon bieneusi; Sarcocystis; Toxoplasma gondii; Cryptosporidium parvum; Parasitology; Feces; Microbiology; Parasite hosting; Zoology; Ribosomal RNA; Internal transcribed spacer; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002487353,0.00009246192,0.0003940899,0.0002986116,0.00008816768,0.000004802617,0.00004744541,0.0001910161,0.0001193932],"category_scores_gemma":[0.0001516083,0.00007993783,0.00007647563,0.0001485615,0.0001487432,0.00007678907,0.0000177471,0.0001493052,0.000007441857],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001508474,"about_ca_system_score_gemma":0.00001682739,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002656253,"about_ca_topic_score_gemma":0.00008377733,"domain_scores_codex":[0.9991186,0.0002103754,0.000402961,0.0001040988,0.00002348384,0.0001404631],"domain_scores_gemma":[0.9989877,0.0002714852,0.00049976,0.00007748829,0.0001343305,0.00002920351],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000114332,0.00009612568,0.6350504,0.000008007842,0.0007874425,0.000006090098,0.0004191626,0.000002376926,0.3617621,0.0001125405,0.0001167514,0.001524643],"study_design_scores_gemma":[0.0007317799,0.0004397573,0.9064605,0.00001072458,0.0008971315,0.0004394714,0.00009943137,0.00005117395,0.09054413,0.0001876536,0.00005883825,0.00007945368],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952322,0.0006683382,0.003375781,0.0000176258,0.0002583448,0.00004419329,0.00001070806,0.000006084108,0.0003867279],"genre_scores_gemma":[0.9993801,0.0003536608,0.0001975763,0.000009128472,0.000019161,0.000001179056,0.000008063183,0.000004517179,0.00002663331],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.27141,"threshold_uncertainty_score":0.325977,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01092899719269981,"score_gpt":0.2614366458177806,"score_spread":0.2505076486250808,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}