{"id":"W2148050511","doi":"10.1093/jac/dki074","title":"Increase in ampC promoter strength due to mutations and deletion of the attenuator in a clinical isolate of cefoxitin-resistant Escherichia coli as determined by RT–PCR","year":2005,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Cefoxitin; Escherichia coli; Attenuator (electronics); Microbiology; Biology; Ceftizoxime; Enterobacteriaceae; Antibiotics; Virology; Cephalosporin; Gene; Genetics; Bacteria; Staphylococcus aureus; Physics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004660076,0.0001312969,0.0003496044,0.00006783863,0.00002039738,0.00001416004,0.0001934682,0.0001403521,0.00001256072],"category_scores_gemma":[0.0001485983,0.0001029657,0.0001190483,0.0001421393,0.0001374741,0.00001227359,0.00003795627,0.0001538779,4.58519e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002602657,"about_ca_system_score_gemma":0.0001533988,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000541865,"about_ca_topic_score_gemma":0.0001979746,"domain_scores_codex":[0.998525,0.000151204,0.0008968267,0.0001657486,0.00010756,0.0001536792],"domain_scores_gemma":[0.999036,0.00003316083,0.0005662333,0.0001749191,0.0001249452,0.00006475873],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001469484,0.0003250454,0.01846034,0.00002408692,0.00003597128,0.000004813408,0.0001299084,0.00001202563,0.977842,0.000002193481,0.0005101752,0.001183965],"study_design_scores_gemma":[0.002727267,0.0005282499,0.1724809,0.000225454,0.00001790976,0.00003863376,0.000048783,0.00003787344,0.8219914,0.00001211205,0.001753064,0.0001384214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983479,0.00006396392,0.0001442879,0.001120701,0.0000558606,0.0002189791,0.00002968752,0.00000108434,0.00001754268],"genre_scores_gemma":[0.9944682,0.0001762759,0.004621644,0.000575922,0.0000901782,7.391088e-7,0.00000450912,0.00001811561,0.00004441249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1558506,"threshold_uncertainty_score":0.4198818,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006355802899782221,"score_gpt":0.2677333777918908,"score_spread":0.2613775748921086,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}