{"id":"W2148184775","doi":"10.1128/jvi.01723-12","title":"HIV-1 Antisense Transcription Is Preferentially Activated in Primary Monocyte-Derived Cells","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Biology; Monocyte; Transcription (linguistics); Molecular biology; HIV Long Terminal Repeat; clone (Java method); Antisense RNA; Transcription factor; Long terminal repeat; Virology; Gene expression; Gene; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001464367,0.0002556425,0.0003228219,0.0002283076,0.0001860745,0.0004477047,0.0000701469,0.000169319,0.001950545],"category_scores_gemma":[0.0001342675,0.0001697089,0.0001949122,0.0001449523,0.0001519904,0.0001154445,0.0001314381,0.0005294146,0.0009220066],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002305815,"about_ca_system_score_gemma":0.0002329683,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007354561,"about_ca_topic_score_gemma":0.001185928,"domain_scores_codex":[0.9998068,0.00003447919,0.00001236903,0.00004283113,0.0000476598,0.00005580876],"domain_scores_gemma":[0.9997856,0.00006146941,0.00002381625,0.000024363,0.00005109751,0.00005365478],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000042096,0.000005479752,0.0001417254,0.00001362719,8.3246e-7,0.00002222544,0.00001734871,0.000005169032,0.9993973,0.00003954862,0.00001900503,0.0002956872],"study_design_scores_gemma":[0.00002008851,0.0003591873,0.006728069,0.000007643625,0.00001438408,0.0003371714,0.00008287307,0.0003265024,0.9879037,0.00006475265,0.004150618,0.000005098492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9865183,0.00194256,0.008086274,0.0001065307,0.00008908794,0.00006885706,0.0007312899,0.0001388409,0.00231814],"genre_scores_gemma":[0.987877,0.001310531,0.004403765,0.0001014532,0.0000537398,0.00007569172,0.0008477133,0.0000325715,0.005297577],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001950545,"threshold_uncertainty_score":0.006525159,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01624229436687246,"score_gpt":0.2236738893127865,"score_spread":0.207431594945914,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}