{"id":"W2148520571","doi":"10.1128/genomea.01038-14","title":"Complete Genome Sequence of Escherichia coli BW25113","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":223,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Université de Sherbrooke","keywords":"Escherichia coli; Strain (injury); Genome; Whole genome sequencing; Biology; Gene; Sequence (biology); Genetics; Mutant; Computational biology; Key (lock)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002212933,0.0001852359,0.0002293736,0.00003425879,0.0001047317,0.00001435788,0.0003181188,0.00007387498,0.0000324459],"category_scores_gemma":[0.00002544072,0.0001861226,0.00008271222,0.0000960114,0.000128915,0.000001004142,0.0002261177,0.00005052283,0.0000378933],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001664359,"about_ca_system_score_gemma":0.00004606483,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003104579,"about_ca_topic_score_gemma":0.00001010417,"domain_scores_codex":[0.9988202,0.00004900722,0.0002948272,0.0003553297,0.00016405,0.0003165733],"domain_scores_gemma":[0.9991818,0.000007302174,0.0001485978,0.0004401681,0.0001450833,0.00007702052],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002903095,0.00004160784,0.002429719,0.00002275867,0.0001087064,4.486562e-7,0.0000882988,0.0002095044,0.9965675,0.0001331407,0.0001140844,0.0002552414],"study_design_scores_gemma":[0.0007798285,0.0007499394,0.03729419,0.000007551537,0.00003567584,0.000002897046,0.00007269104,0.0000714954,0.01080258,0.0003199303,0.9494891,0.000374112],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9915564,0.0009760826,0.001118445,0.00006109251,0.0002282817,0.0002246294,0.0005373198,0.000004192896,0.005293557],"genre_scores_gemma":[0.996199,0.0003754466,0.001467657,0.0004759778,0.000193572,0.00002470117,0.0004259382,0.00002149623,0.0008161999],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9857649,"threshold_uncertainty_score":0.758986,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02692026567171593,"score_gpt":0.2475566595993702,"score_spread":0.2206363939276542,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}